RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 FUBP3Q96I24 572 aaKnown RBP eCLIP15.72■□□□□ 0.11
HMGXB4-206ENST00000466438 TIPINQ9BVW5 301 aa15.72■□□□□ 0.11
HMGXB4-206ENST00000466438 FTSJ1Q9UET6 329 aa15.72■□□□□ 0.11
HMGXB4-206ENST00000466438 C2CD2Q9Y426 696 aa15.72■□□□□ 0.11
HMGXB4-206ENST00000466438 TEX15Q9BXT5 2789 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 METTL12A8MUP2 240 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 PCDHGA12O60330 932 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 CDK4P11802 303 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 PLS3P13797 630 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 GJB2P29033 226 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 CDC25AP30304 524 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 LIG4P49917 911 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 ST3GAL1Q11201 340 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 KCNH2Q12809 1159 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 SF3A1Q15459 793 aaKnown RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 INAVAQ3KP66 663 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 SPATA2LQ8IUW3 424 aaPredicted RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 DIS3L2Q8IYB7 885 aaKnown RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 PDCL2Q8N4E4 241 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 FAM184AQ8NB25 1140 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 C1orf216Q8TAB5 229 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 DPP3Q9NY33 737 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 USP36Q9P275 1121 aaKnown RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 CPSF3Q9UKF6 684 aaKnown RBP15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 GTF3C4Q9UKN8 822 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 DNM3Q9UQ16 869 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 PCDHB6Q9Y5E3 794 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 RAD54BQ9Y620 910 aa15.71■□□□□ 0.11
HMGXB4-206ENST00000466438 E2F8A0AVK6 867 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 ZNF840PA6NDX5 716 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 E9PMD0 336 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 HNRNPDLO14979 420 aaKnown RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 OAS1P00973 400 aaKnown RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 ACAT1P24752 427 aaKnown RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 ACTN2P35609 894 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 MAGEA11P43364 429 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 PPP3CCP48454 512 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 CCT8P50990 548 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 AFF3P51826 1226 aaKnown RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 CLDN6P56747 220 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 MYL7Q01449 175 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 TARDBPQ13148 414 aaKnown RBP eCLIP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 LY6DQ14210 128 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 KIF19Q2TAC6 998 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 SPATA17Q96L03 361 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 CEP295NLQ96MC4 621 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 ZNF560Q96MR9 790 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 ASB7Q9H672 318 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 EIF2B4Q9UI10 523 aaKnown RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 SNX11Q9Y5W9 270 aa15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 UBR5O95071 2799 aaPredicted RBP15.7■□□□□ 0.1
HMGXB4-206ENST00000466438 A0A0B4J269 797 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 H0YCG3 227 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 GFRA2O00451 464 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 BRINP1O60477 761 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 CSNK1EP49674 416 aaKnown RBP15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 UCNP55089 124 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 TMPRSS3P57727 454 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 CCDC142Q17RM4 750 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 ERICH1Q86X53 443 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 SNX29Q8TEQ0 813 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 IGSF8Q969P0 613 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 LGMNQ99538 433 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 MSTO1Q9BUK6 570 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 ITM2CQ9NQX7 267 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 EHD2Q9NZN4 543 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 LRWD1Q9UFC0 647 aa15.69■□□□□ 0.1
HMGXB4-206ENST00000466438 TRIM24O15164 1050 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 RFPL3O75679 317 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 CTDNEP1O95476 244 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 PIGRP01833 764 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 C1SP09871 688 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 OXTRP30559 389 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 PNPLA4P41247 253 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 USP46P62068 366 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 TBC1D25Q3MII6 688 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 COLEC12Q5KU26 742 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 GRAMD4Q6IC98 578 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 DENND5BQ6ZUT9 1274 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 TMEM86AQ8N2M4 240 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 TTC9Q92623 222 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 KCNN1Q92952 543 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 MED8Q96G25 268 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 TTLL2Q9BWV7 592 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 L1RE1Q9UN81 338 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 KNL1Q8NG31 2342 aa15.68■□□□□ 0.1
HMGXB4-206ENST00000466438 TMEM131Q92545 1883 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 KCNJ18B7U540 433 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 PAPSS1O43252 624 aaPredicted RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 MBL2P11226 248 aaPredicted RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 FDPSP14324 419 aaKnown RBP15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 NCKAP1LP55160 1127 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 TEAD4Q15561 434 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 ANO4Q32M45 955 aa15.67■□□□□ 0.1
HMGXB4-206ENST00000466438 HES3Q5TGS1 186 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms