RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 CEBPZQ03701 1054 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 CUL4AQ13619 759 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 SMAD1Q15797 465 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 DDR2Q16832 855 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 HSF5Q4G112 596 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 TAF1BQ53T94 588 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 FAM173BQ6P4H8 233 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 SYCP3Q8IZU3 236 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 TMEM86AQ8N2M4 240 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 CSGALNACT2Q8N6G5 542 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 CXorf38Q8TB03 319 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 SH3RF2Q8TEC5 729 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 NOC3LQ8WTT2 800 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 LEO1Q8WVC0 666 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 CYP2S1Q96SQ9 504 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 CDC6Q99741 560 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 ARID3AQ99856 593 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 FGFBP2Q9BYJ0 223 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 PANK2Q9BZ23 570 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 PCIF1Q9H4Z3 704 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 FAM124BQ9H5Z6 455 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 TMEM206Q9H813 350 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 PDE11AQ9HCR9 933 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 DDX43Q9NXZ2 648 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 RBAKQ9NYW8 714 aaPredicted RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 SUSD2Q9UGT4 822 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 GTF3C4Q9UKN8 822 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 ITGA11Q9UKX5 1188 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 CYP8B1Q9UNU6 501 aa10.4□□□□□ -0.74
USP39-212ENST00000465514 FNDC3AQ9Y2H6 1198 aaKnown RBP10.4□□□□□ -0.74
USP39-212ENST00000465514 TRAV19A0A0A6YYK7 116 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 E9PAM4 449 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 CILPO75339 1184 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 NOL4O94818 638 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 KAT7O95251 611 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 CYP17A1P05093 508 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 KRT19P08727 400 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 USP17L7P0C7H9 530 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 GNSP15586 552 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 MAOBP27338 520 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 SLC6A11P48066 632 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 CXADRP78310 365 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 RBP5P82980 135 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 MYL7Q01449 175 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 KDSRQ06136 332 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 RESTQ13127 1097 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 CCDC142Q17RM4 750 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 INTS6LQ5JSJ4 861 aaKnown RBP10.39□□□□□ -0.75
USP39-212ENST00000465514 CCDC73Q6ZRK6 1079 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 OSTM1Q86WC4 334 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 FMNL3Q8IVF7 1028 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 LRRC52Q8N7C0 313 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 RHBDD1Q8TEB9 315 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 TRMT2BQ96GJ1 504 aaKnown RBP10.39□□□□□ -0.75
USP39-212ENST00000465514 PKMYT1Q99640 499 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 CBWD1Q9BRT8 395 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 SEMA4CQ9C0C4 833 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 GAREM1Q9H706 876 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 ABCB6Q9NP58 842 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 OLFML3Q9NRN5 406 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 TM7SF3Q9NS93 570 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 PANK4Q9NVE7 773 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 GDAP2Q9NXN4 497 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 UXTQ9UBK9 157 aaPredicted RBP10.39□□□□□ -0.75
USP39-212ENST00000465514 SIX4Q9UIU6 781 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 BTBD3Q9Y2F9 522 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 SNX9Q9Y5X1 595 aa10.39□□□□□ -0.75
USP39-212ENST00000465514 A0A087X0B3 334 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 FRMD3A2A2Y4 597 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 B8ZZF3 427 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 GABRDO14764 452 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 FLRT2O43155 660 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 HCRTO43612 131 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 SLC28A2O43868 658 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 PRPF6O94906 941 aaKnown RBP10.38□□□□□ -0.75
USP39-212ENST00000465514 CER1O95813 267 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 NTRK1P04629 796 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 APODP05090 189 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 ZNF883P0CG24 379 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 SYT1P21579 422 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 STAT6P42226 847 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 LHX1P48742 406 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 MYO1EQ12965 1108 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 ALCAMQ13740 583 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 SOWAHAQ2M3V2 549 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 SYCP2LQ5T4T6 812 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 DHRS13Q6UX07 377 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 C12orf40Q86WS4 652 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 SPATA2LQ8IUW3 424 aaPredicted RBP10.38□□□□□ -0.75
USP39-212ENST00000465514 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 TOP6BLQ8N6T0 577 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 ARL14EPQ8N8R7 260 aaPredicted RBP10.38□□□□□ -0.75
USP39-212ENST00000465514 SPATA18Q8TC71 538 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 BAP1Q92560 729 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 ZNF419Q96HQ0 510 aaPredicted RBP10.38□□□□□ -0.75
USP39-212ENST00000465514 MYRFLQ96LU7 910 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 PNKPQ96T60 521 aa10.38□□□□□ -0.75
USP39-212ENST00000465514 MTMR12Q9C0I1 747 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms