RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ATICP31939 592 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 MTHFSP49914 203 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ITGA8P53708 1063 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 BCAT1P54687 386 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ALDH18A1P54886 795 aaKnown RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 ITIH3Q06033 890 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ATP1A4Q13733 1029 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 CLCA4Q14CN2 919 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 MANEALQ5VSG8 457 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 RGS7BPQ6MZT1 257 aaPredicted RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 TTC30AQ86WT1 665 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ZNF280BQ86YH2 543 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 BOLLQ8N9W6 283 aaKnown RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 ABHD5Q8WTS1 349 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 FAM136AQ96C01 138 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 COQ10AQ96MF6 247 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 NUDT22Q9BRQ3 303 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ALOXE3Q9BYJ1 711 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ZNF768Q9H5H4 540 aaKnown RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 CASS4Q9NQ75 786 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 VSX1Q9NZR4 365 aaPredicted RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 ANKFY1Q9P2R3 1169 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ZNF69Q9UC07 566 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
CLK1-206ENST00000461326 ANAPC4Q9UJX5 808 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 NFU1Q9UMS0 254 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 DTNAQ9Y4J8 743 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 TMEM200CA6NKL6 621 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 AQP12BA6NM10 295 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 TRIM38O00635 465 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 ASNA1O43681 348 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 LPXNO60711 386 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 SNX2O60749 519 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 NCR1O76036 304 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 NTSR2O95665 410 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 CSF1RP07333 972 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 RBL1P28749 1068 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 CXCR5P32302 372 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 PGDP52209 483 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 BLOC1S1P78537 153 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 TIAL1Q01085 375 aaKnown RBP eCLIP4.42□□□□□ -1.7
CLK1-206ENST00000461326 EFR3AQ14156 821 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 GEN1Q17RS7 908 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 CD300EQ496F6 205 aaPredicted RBP4.42□□□□□ -1.7
CLK1-206ENST00000461326 GGT6Q6P531 493 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 KLHL17Q6TDP4 642 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 RASGRP3Q8IV61 690 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 ARHGEF19Q8IW93 802 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 NRSN1Q8IZ57 195 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 DNAJB14Q8TBM8 379 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 STT3BQ8TCJ2 826 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 OSCP1Q8WVF1 389 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 SMG7Q92540 1137 aaKnown RBP4.42□□□□□ -1.7
CLK1-206ENST00000461326 PPP2R3CQ969Q6 453 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 GRAMD1AQ96CP6 724 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 TBATAQ96M53 351 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 SAYSD1Q9NPB0 183 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 IGSF9Q9P2J2 1179 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 GRHPRQ9UBQ7 328 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 TESQ9UGI8 421 aaKnown RBP4.42□□□□□ -1.7
CLK1-206ENST00000461326 VPS51Q9UID3 782 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 TBC1D30Q9Y2I9 924 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 FRMD4BQ9Y2L6 1034 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 GPR52Q9Y2T5 361 aa4.42□□□□□ -1.7
CLK1-206ENST00000461326 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.42□□□□□ -1.7
CLK1-206ENST00000461326 CCDC78A2IDD5 438 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 hCG_1984214I3L0E3 225 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 M0R3H8 397 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 PIP5K1BO14986 540 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 HKR1P10072 659 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 SRGNP10124 158 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 CD19P15391 556 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 PECAM1P16284 738 aaPredicted RBP4.41□□□□□ -1.7
CLK1-206ENST00000461326 NXPH1P58417 271 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 KCNAB1Q14722 419 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 ARHGAP15Q53QZ3 475 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 TMTC4Q5T4D3 741 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 RAP1GAP2Q684P5 730 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 ABLIM2Q6H8Q1 611 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 CCDC70Q6NSX1 233 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 RAB11FIP4Q86YS3 637 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 PAF1Q8N7H5 531 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 B3GALNT2Q8NCR0 500 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 CPEB3Q8NE35 698 aaKnown RBP4.41□□□□□ -1.7
CLK1-206ENST00000461326 STYXQ8WUJ0 223 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 WDR60Q8WVS4 1066 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 TBC1D20Q96BZ9 403 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 RTKNQ9BST9 563 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 ALG8Q9BVK2 526 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 VN1R3Q9BXE9 311 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 TPSD1Q9BZJ3 242 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 UNKLQ9H9P5 680 aaKnown RBP4.41□□□□□ -1.7
CLK1-206ENST00000461326 TBCCD1Q9NVR7 557 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 SYBUQ9NX95 663 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 SH2B3Q9UQQ2 575 aa4.41□□□□□ -1.7
CLK1-206ENST00000461326 MRPS17Q9Y2R5 130 aaKnown RBP4.41□□□□□ -1.7
CLK1-206ENST00000461326 PCDHGB3Q9Y5G1 929 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms