RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 FBXO44Q9H4M3 255 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 EBF3Q9H4W6 596 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DUS2Q9NX74 493 aaKnown RBP13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 HESX1Q9UBX0 185 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 APEX2Q9UBZ4 518 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CCL26Q9Y258 94 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CACNA1IQ9P0X4 2223 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 COL4A3Q01955 1670 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PATJQ8NI35 1801 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 LRRC10BA6NIK2 292 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ABL1P00519 1130 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KRT5P13647 590 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF18P17022 549 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ACO1P21399 889 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 COPB1P53618 953 aaKnown RBP13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MTF1Q14872 753 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARL14EPQ8N8R7 260 aaPredicted RBP13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ANKRD52Q8NB46 1076 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RBBP8NLQ8NC74 664 aaPredicted RBP13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CCDC26Q8TAB7 109 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 OSCP1Q8WVF1 389 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NELL1Q92832 810 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KAT5Q92993 513 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KREMEN1Q96MU8 473 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TTLL2Q9BWV7 592 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 UBXN6Q9BZV1 441 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PNPLA8Q9NP80 782 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CNTN6Q9UQ52 1028 aa13.97□□□□□ -0.17
RAB11FIP3-207ENST00000461009 USP34Q70CQ2 3546 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GOLGA6L19H0YKK7 550 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MED7O43513 233 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DRD1P21728 446 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CNR2P34972 360 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 USP8P40818 1118 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CACNA2D1P54289 1103 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CNGA2Q16280 664 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARHGAP44Q17R89 818 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FILIP1LQ4L180 1135 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TXNDC11Q6PKC3 985 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CLEC20AQ6ZU45 233 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DHX40Q8IX18 779 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 OVCA2Q8WZ82 227 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FBXO32Q969P5 355 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CYP2S1Q96SQ9 504 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 EPC1Q9H2F5 836 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PLCB1Q9NQ66 1216 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RBM12Q9NTZ6 932 aaKnown RBP13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 IL37Q9NZH6 218 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DNAJC12Q9UKB3 198 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GMEB2Q9UKD1 530 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARHGAP26Q9UNA1 814 aa13.96□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.18
RAB11FIP3-207ENST00000461009 C2orf78A6NCI8 922 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 RNF225M0QZC1 329 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TRDMT1O14717 391 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SLC9A3R1O14745 358 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TNFRSF10BO14763 440 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LILRB5O75023 590 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TADA3O75528 432 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 BEST1O76090 585 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 NFATC1O95644 943 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ID4P47928 161 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SLC5A3P53794 718 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 BCAT1P54687 386 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 BPIFB4P59827 614 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 FOXK2Q01167 660 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SATB1Q01826 763 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 UBXN1Q04323 297 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 BST2Q10589 180 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 KCNMA1Q12791 1236 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TAF10Q12962 218 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 CCINQ13939 588 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 IQCB1Q15051 598 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ZNF77Q15935 545 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 FBXO43Q4G163 708 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 KLHDC7AQ5VTJ3 777 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TRIM68Q6AZZ1 485 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LCLAT1Q6UWP7 414 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 DDX42Q86XP3 938 aaKnown RBP eCLIP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 KIAA1958Q8N8K9 716 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SUMF1Q8NBK3 374 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ZMIZ2Q8NF64 920 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SH3RF2Q8TEC5 729 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 PCMTD1Q96MG8 357 aaPredicted RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 P2RY13Q9BPV8 354 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ECT2Q9H8V3 914 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 HPS4Q9NQG7 708 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TMEM30AQ9NV96 361 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 TSPAN16Q9UKR8 245 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 DAAM1Q9Y4D1 1078 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ANAPC1Q9H1A4 1944 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 F5P12259 2224 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 COL4A2P08572 1712 aa13.95□□□□□ -0.18
RAB11FIP3-207ENST00000461009 ZNF840PA6NDX5 716 aa13.94□□□□□ -0.18
RAB11FIP3-207ENST00000461009 LGALS16A8MUM7 142 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms