RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 POLR3GLQ9BT43 218 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 ZNF747Q9BV97 191 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 NAA15Q9BXJ9 866 aaKnown RBP3.93□□□□□ -1.78
CCDC93-204ENST00000460781 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 DHX36Q9H2U1 1008 aaKnown RBP3.93□□□□□ -1.78
CCDC93-204ENST00000460781 SMURF2Q9HAU4 748 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 EHD3Q9NZN3 535 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 TMOD4Q9NZQ9 345 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 COL20A1Q9P218 1284 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 NDRG4Q9ULP0 352 aaKnown RBP3.93□□□□□ -1.78
CCDC93-204ENST00000460781 DAAM1Q9Y4D1 1078 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 DAPK1P53355 1430 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 PTCH1Q13635 1447 aa3.93□□□□□ -1.78
CCDC93-204ENST00000460781 TNS1Q9HBL0 1735 aaKnown RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MARCH11A6NNE9 402 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 hCG_1984214I3L0E3 225 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 QSOX1O00391 747 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PODXLO00592 558 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 HNRNPDLO14979 420 aaKnown RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 RAMP2O60895 175 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 URI1O94763 535 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 ONECUT2O95948 504 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 SLC5A1P13866 664 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 CD19P15391 556 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 FGFR2P21802 821 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 DGKEP52429 567 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 ZNF134P52741 427 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 SUMO2P61956 95 aaKnown RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MYO1EQ12965 1108 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 BMPR2Q13873 1038 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 CCNIQ14094 377 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 KLHDC7AQ5VTJ3 777 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PGBD2Q6P3X8 592 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 Q6ZNX1 250 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 GRASPQ7Z6J2 395 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MRGPREQ86SM8 312 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 GPR149Q86SP6 731 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MICU3Q86XE3 530 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 FSTL5Q8N475 847 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 DNAJB14Q8TBM8 379 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 ASB10Q8WXI3 467 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 BRI3BPQ8WY22 251 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 GRAMD1AQ96CP6 724 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 SNX27Q96L92 541 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 COQ10AQ96MF6 247 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 EIF3CQ99613 913 aaKnown RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PRRX2Q99811 253 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 ADAM2Q99965 735 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MESP1Q9BRJ9 268 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MLST8Q9BVC4 326 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 COLEC11Q9BWP8 271 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 INO80BQ9C086 356 aaPredicted RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 CHST8Q9H2A9 424 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PLCB1Q9NQ66 1216 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 GPRC5BQ9NZH0 403 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 MRPS17Q9Y2R5 130 aaKnown RBP3.92□□□□□ -1.78
CCDC93-204ENST00000460781 CDY1Q9Y6F8 540 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 C1orf167Q5SNV9 1468 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 PXDNQ92626 1479 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 USP32Q8NFA0 1604 aa3.92□□□□□ -1.78
CCDC93-204ENST00000460781 SLIT2O94813 1529 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 PLCH1Q4KWH8 1693 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 DCLK1O15075 740 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 PPM1DO15297 605 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 RRP9O43818 475 aaKnown RBP3.91□□□□□ -1.78
CCDC93-204ENST00000460781 PRKCBP05771 671 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 EBLN1P0CF75 366 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
CCDC93-204ENST00000460781 TSHRP16473 764 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 NR4A1P22736 598 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 GATA3P23771 443 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 ZEB1P37275 1124 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-204ENST00000460781 LIPAP38571 399 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 FOLR3P41439 243 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 PGDP52209 483 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 BLMP54132 1417 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-204ENST00000460781 TNFAIP2Q03169 654 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 GPS1Q13098 491 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 CHAF1AQ13111 956 aaPredicted RBP3.91□□□□□ -1.78
CCDC93-204ENST00000460781 AKNAD1Q5T1N1 836 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 FAXCQ5TGI0 409 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 HECTD2Q5U5R9 776 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 VPS53Q5VIR6 699 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 CDC42BPGQ6DT37 1551 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 ZNF804AQ7Z570 1209 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 P3H2Q8IVL5 708 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 LNX2Q8N448 690 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 MYCBPAPQ8TBZ2 947 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 MORC4Q8TE76 937 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 TMEM171Q8WVE6 324 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 LPIN2Q92539 896 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 MAML1Q92585 1016 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 NACC2Q96BF6 587 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 VPS50Q96JG6 964 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 HIST1H2AAQ96QV6 131 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.91□□□□□ -1.784e-6■■■□□ 18.8
CCDC93-204ENST00000460781 CXorf36Q9H7Y0 433 aa3.91□□□□□ -1.78
CCDC93-204ENST00000460781 XPNPEP3Q9NQH7 507 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms