RNA–Protein interactions for RNA: ENST00000460781.1

CCDC93-204, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-204ENST00000460781 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
CCDC93-204ENST00000460781 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
CCDC93-204ENST00000460781 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
CCDC93-204ENST00000460781 SENP3Q9H4L4 574 aaPredicted RBP13.01□□□□□ -0.33
CCDC93-204ENST00000460781 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
CCDC93-204ENST00000460781 FOXD1Q16676 465 aa11.9□□□□□ -0.5
CCDC93-204ENST00000460781 ADRA2BP18089 450 aa11.61□□□□□ -0.55
CCDC93-204ENST00000460781 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
CCDC93-204ENST00000460781 PIAS4Q8N2W9 510 aaPredicted RBP11.41□□□□□ -0.58
CCDC93-204ENST00000460781 MSH5O43196 834 aa11.08□□□□□ -0.64
CCDC93-204ENST00000460781 PPP4R3CPQ6ZMV5 832 aa10.89□□□□□ -0.67
CCDC93-204ENST00000460781 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
CCDC93-204ENST00000460781 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
CCDC93-204ENST00000460781 KCNA4P22459 653 aa10.78□□□□□ -0.68
CCDC93-204ENST00000460781 CNKSR2Q8WXI2 1034 aa10.58□□□□□ -0.72
CCDC93-204ENST00000460781 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
CCDC93-204ENST00000460781 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
CCDC93-204ENST00000460781 SLC4A1APQ9BWU0 796 aaKnown RBP10.42□□□□□ -0.74
CCDC93-204ENST00000460781 EHMT2Q96KQ7 1210 aa10.35□□□□□ -0.75
CCDC93-204ENST00000460781 DMRT2Q9Y5R5 561 aa10.33□□□□□ -0.76
CCDC93-204ENST00000460781 RNF216Q9NWF9 866 aaPredicted RBP10.31□□□□□ -0.76
CCDC93-204ENST00000460781 HOXD11P31277 338 aaPredicted RBP10.15□□□□□ -0.78
CCDC93-204ENST00000460781 DCAF8L1A6NGE4 600 aa10.09□□□□□ -0.79
CCDC93-204ENST00000460781 DNAJC5BQ9UF47 199 aa10.03□□□□□ -0.8
CCDC93-204ENST00000460781 CSRNP3Q8WYN3 585 aa9.97□□□□□ -0.81
CCDC93-204ENST00000460781 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
CCDC93-204ENST00000460781 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.87□□□□□ -0.835e-7■■■□□ 15.2
CCDC93-204ENST00000460781 ZBTB22O15209 634 aa9.82□□□□□ -0.84
CCDC93-204ENST00000460781 MYCNP04198 464 aaPredicted RBP9.77□□□□□ -0.85
CCDC93-204ENST00000460781 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
CCDC93-204ENST00000460781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-204ENST00000460781 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
CCDC93-204ENST00000460781 APLP2Q06481 763 aa9.65□□□□□ -0.86
CCDC93-204ENST00000460781 SAMD1Q6SPF0 538 aaPredicted RBP9.64□□□□□ -0.87
CCDC93-204ENST00000460781 POTEDQ86YR6 584 aa9.64□□□□□ -0.87
CCDC93-204ENST00000460781 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
CCDC93-204ENST00000460781 U3KPZ7 1027 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-204ENST00000460781 C1QBPQ07021 282 aaKnown RBP9.38□□□□□ -0.91
CCDC93-204ENST00000460781 RNF39Q9H2S5 420 aa9.38□□□□□ -0.91
CCDC93-204ENST00000460781 CAPN15O75808 1086 aa9.36□□□□□ -0.91
CCDC93-204ENST00000460781 ZNF219Q9P2Y4 722 aaPredicted RBP9.35□□□□□ -0.91
CCDC93-204ENST00000460781 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
CCDC93-204ENST00000460781 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
CCDC93-204ENST00000460781 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
CCDC93-204ENST00000460781 FBLN2P98095 1184 aa9.2□□□□□ -0.94
CCDC93-204ENST00000460781 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-204ENST00000460781 FKBP8Q14318 412 aa9.16□□□□□ -0.94
CCDC93-204ENST00000460781 ZBTB12Q9Y330 459 aaPredicted RBP9.16□□□□□ -0.94
CCDC93-204ENST00000460781 POLA2Q14181 598 aa9.15□□□□□ -0.94
CCDC93-204ENST00000460781 ABCB7O75027 752 aa9.12□□□□□ -0.95
CCDC93-204ENST00000460781 DSG3P32926 999 aa8.99□□□□□ -0.97
CCDC93-204ENST00000460781 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
CCDC93-204ENST00000460781 MKRN4PQ13434 485 aaPredicted RBP8.91□□□□□ -0.98
CCDC93-204ENST00000460781 FBXO3Q9UK99 471 aa8.88□□□□□ -0.99
CCDC93-204ENST00000460781 ZNF692Q9BU19 519 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-204ENST00000460781 SPDYE2BA6NHP3 402 aa8.83□□□□□ -1
CCDC93-204ENST00000460781 SPDYE6P0CI01 402 aa8.83□□□□□ -1
CCDC93-204ENST00000460781 SPDYE2Q495Y8 402 aa8.83□□□□□ -1
CCDC93-204ENST00000460781 OSCARQ8IYS5 282 aa8.83□□□□□ -1
CCDC93-204ENST00000460781 RBM42Q9BTD8 480 aaKnown RBP8.76□□□□□ -1.01
CCDC93-204ENST00000460781 AMER1Q5JTC6 1135 aaPredicted RBP8.72□□□□□ -1.01
CCDC93-204ENST00000460781 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC93-204ENST00000460781 STAG3Q9UJ98 1225 aa8.69□□□□□ -1.02
CCDC93-204ENST00000460781 PLEKHG5O94827 1062 aa8.68□□□□□ -1.02
CCDC93-204ENST00000460781 PROM2Q8N271 834 aa8.67□□□□□ -1.02
CCDC93-204ENST00000460781 SSUH2Q9Y2M2 353 aa8.67□□□□□ -1.02
CCDC93-204ENST00000460781 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.02
CCDC93-204ENST00000460781 PLCD3Q8N3E9 789 aa8.62□□□□□ -1.03
CCDC93-204ENST00000460781 KLHL34Q8N239 644 aa8.61□□□□□ -1.03
CCDC93-204ENST00000460781 AKT1S1Q96B36 256 aa8.6□□□□□ -1.03
CCDC93-204ENST00000460781 SPDYE1Q8NFV5 336 aaPredicted RBP8.57□□□□□ -1.04
CCDC93-204ENST00000460781 MIER1Q8N108 512 aa8.56□□□□□ -1.04
CCDC93-204ENST00000460781 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
CCDC93-204ENST00000460781 CLEC11AQ9Y240 323 aa8.55□□□□□ -1.04
CCDC93-204ENST00000460781 ZBTB47Q9UFB7 747 aaPredicted RBP8.54□□□□□ -1.04
CCDC93-204ENST00000460781 PRR29P0C7W0 189 aa8.48□□□□□ -1.05
CCDC93-204ENST00000460781 REM2Q8IYK8 340 aaPredicted RBP8.46□□□□□ -1.06
CCDC93-204ENST00000460781 SPOCK2Q92563 424 aa8.46□□□□□ -1.06
CCDC93-204ENST00000460781 IFNLR1Q8IU57 520 aaPredicted RBP8.44□□□□□ -1.06
CCDC93-204ENST00000460781 DCAF8L2P0C7V8 631 aa8.42□□□□□ -1.06
CCDC93-204ENST00000460781 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
CCDC93-204ENST00000460781 PITPNM1O00562 1244 aa8.35□□□□□ -1.07
CCDC93-204ENST00000460781 NPM1P06748 294 aaKnown RBP eCLIP8.33□□□□□ -1.08
CCDC93-204ENST00000460781 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
CCDC93-204ENST00000460781 GSE1Q14687 1217 aa8.3□□□□□ -1.08
CCDC93-204ENST00000460781 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
CCDC93-204ENST00000460781 DCAF8Q5TAQ9 597 aa8.27□□□□□ -1.09
CCDC93-204ENST00000460781 TRIM41Q8WV44 630 aa8.27□□□□□ -1.09
CCDC93-204ENST00000460781 CREBZFQ9NS37 354 aa8.25□□□□□ -1.09
CCDC93-204ENST00000460781 PAK3O75914 559 aaPredicted RBP8.22□□□□□ -1.09
CCDC93-204ENST00000460781 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
CCDC93-204ENST00000460781 CHRDL2Q6WN34 429 aa8.22□□□□□ -1.09
CCDC93-204ENST00000460781 TAOK2Q9UL54 1235 aa8.22□□□□□ -1.09
CCDC93-204ENST00000460781 PKD2Q13563 968 aa8.2□□□□□ -1.1
CCDC93-204ENST00000460781 CHADLQ6NUI6 762 aa8.2□□□□□ -1.1
CCDC93-204ENST00000460781 FARP1Q9Y4F1 1045 aaPredicted RBP8.16□□□□□ -1.1
CCDC93-204ENST00000460781 NUBP1P53384 320 aa8.15□□□□□ -1.1
CCDC93-204ENST00000460781 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.14□□□□□ -1.11
CCDC93-204ENST00000460781 SLC24A1O60721 1099 aa8.13□□□□□ -1.11
CCDC93-204ENST00000460781 TSPYL2Q9H2G4 693 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 195.5 ms