RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 CHRM2P08172 466 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 EGR2P11161 476 aaPredicted RBP6.32□□□□□ -1.4
CCDC50-203ENST00000460064 LIPAP38571 399 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 ADAM17P78536 824 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 FZD5Q13467 585 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 TAF12Q16514 161 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 P3H1Q32P28 736 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 KCNV1Q6PIU1 500 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 CYP26C1Q6V0L0 522 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 MAVSQ7Z434 540 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 ASB10Q8WXI3 467 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 RSC1A1Q92681 617 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 LENG9Q96B70 501 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 R3HDM4Q96D70 268 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 NUDT22Q9BRQ3 303 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 WDR11Q9BZH6 1224 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 BRD8Q9H0E9 1235 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 TAF1DQ9H5J8 278 aaPredicted RBP6.32□□□□□ -1.4
CCDC50-203ENST00000460064 PRDM8Q9NQV8 689 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 KLC4Q9NSK0 619 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 RIMKLBQ9ULI2 386 aa6.32□□□□□ -1.4
CCDC50-203ENST00000460064 REXO2Q9Y3B8 237 aaKnown RBP6.32□□□□□ -1.4
CCDC50-203ENST00000460064 ADGRA2Q96PE1 1338 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 PIPSLA2A3N6 862 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 EIF3FO00303 357 aaPredicted RBP6.31□□□□□ -1.4
CCDC50-203ENST00000460064 PROM1O43490 865 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 PEX1O43933 1283 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 TAF5LO75529 589 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 CLCN2P51788 898 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 PNLIPRP1P54315 467 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 PDE1AP54750 535 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 TUBA3CQ13748 450 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 CSHL1Q14406 222 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 LY6G5CQ5SRR4 150 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 TEDDM1Q5T9Z0 273 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 ABHD17BQ5VST6 288 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 TUBA3EQ6PEY2 450 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
CCDC50-203ENST00000460064 METTL25Q8N6Q8 603 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 SUPT20HQ8NEM7 779 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
CCDC50-203ENST00000460064 UBXN10Q96LJ8 280 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 Q96MF0 132 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 TRAPPC9Q96Q05 1148 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 GPR20Q99678 358 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 AIFM2Q9BRQ8 373 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 FSCN3Q9NQT6 498 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 KCTD5Q9NXV2 234 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 EHD3Q9NZN3 535 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 DKK3Q9UBP4 350 aa6.31□□□□□ -1.4
CCDC50-203ENST00000460064 CCNL1Q9UK58 526 aaPredicted RBP6.31□□□□□ -1.4
CCDC50-203ENST00000460064 VWC2LB2RUY7 222 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 WDR47O94967 919 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 PYGLP06737 847 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 TMEM225BP0DP42 221 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 CST5P28325 142 aaPredicted RBP6.3□□□□□ -1.4
CCDC50-203ENST00000460064 PBX1P40424 430 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 EIF4A1P60842 406 aaKnown RBP6.3□□□□□ -1.4
CCDC50-203ENST00000460064 CLCA4Q14CN2 919 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 ACOX1Q15067 660 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 PTPRRQ15256 657 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 RPS6KA2Q15349 733 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 BTBD16Q32M84 506 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 ADCK5Q3MIX3 580 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 TMEM196Q5HYL7 178 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 ZNF618Q5T7W0 954 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 CCDC70Q6NSX1 233 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 MMS22LQ6ZRQ5 1243 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 RRAGAQ7L523 313 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 SOCS4Q8WXH5 440 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 RSPRY1Q96DX4 576 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 WDR24Q96S15 920 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 DDX23Q9BUQ8 820 aaKnown RBP6.3□□□□□ -1.4
CCDC50-203ENST00000460064 ALG8Q9BVK2 526 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 SERHL2Q9H4I8 314 aa6.3□□□□□ -1.4
CCDC50-203ENST00000460064 SEPSECSQ9HD40 501 aaKnown RBP6.3□□□□□ -1.4
CCDC50-203ENST00000460064 B9A039 149 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 PPP6R2O75170 966 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 FAM155BO75949 473 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 ONECUT2O95948 504 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 IL6RP08887 468 aaPredicted RBP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 HTR7P34969 479 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 FOLR3P41439 243 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 GSTM5P46439 218 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 AARSP49588 968 aaKnown RBP eCLIP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 FOXE3Q13461 319 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 CUL4BQ13620 913 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 BMPR2Q13873 1038 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 PTPAQ15257 358 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 FBXO47Q5MNV8 452 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 RHOUQ7L0Q8 258 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 RAB11FIP2Q7L804 512 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 MRGPREQ86SM8 312 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 LCORLQ8N3X6 602 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 OR6Y1Q8NGX8 325 aa6.29□□□□□ -1.4
CCDC50-203ENST00000460064 SH3RF3Q8TEJ3 882 aaPredicted RBP6.29□□□□□ -1.4
CCDC50-203ENST00000460064 PNISRQ8TF01 805 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms