RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 TPM3P06753 285 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 RARGP13631 454 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 SOX5P35711 763 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 GPD2P43304 727 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 ACADSBP45954 432 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 SLC7A9P82251 487 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 ADIGQ0VDE8 80 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 ARHGAP29Q52LW3 1261 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 PMF1Q6P1K2 205 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 HFE2Q6ZVN8 426 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 DDX42Q86XP3 938 aaKnown RBP eCLIP14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 RNF214Q8ND24 703 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 GOLGA1Q92805 767 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 RSPRY1Q96DX4 576 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 NOX5Q96PH1 765 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 SLC22A12Q96S37 553 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 CDK5RAP1Q96SZ6 601 aaKnown RBP14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 ULBP1Q9BZM6 244 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 CCSER2Q9H7U1 834 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 CNGB3Q9NQW8 809 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 WNT16Q9UBV4 365 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 ARHGAP26Q9UNA1 814 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 CCL26Q9Y258 94 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 CPQQ9Y646 472 aa14.74□□□□□ -0.05
GTF3C3-206ENST00000448539 GREB1Q4ZG55 1949 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 TMEM221A6NGB7 291 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 M0R296 226 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 COCHO43405 550 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 FBXO21O94952 628 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 CCDC172P0C7W6 258 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 CYP11B1P15538 503 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 ATP5C1P36542 298 aaKnown RBP14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 SNX16P57768 344 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 YWHAGP61981 247 aaKnown RBP eCLIP14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 PLCB2Q00722 1185 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 FCHO2Q0JRZ9 810 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 NR1I3Q14994 352 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 C10orf120Q5SQS8 335 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 BTBD8Q5XKL5 378 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 PM20D1Q6GTS8 502 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 RSRC2Q7L4I2 434 aaKnown RBP14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 PASD1Q8IV76 773 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 FMNL3Q8IVF7 1028 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 CSGALNACT1Q8TDX6 532 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 SH3RF2Q8TEC5 729 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 STK32AQ8WU08 396 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 RNF38Q9H0F5 515 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 MFSD1Q9H3U5 465 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 NMUR1Q9HB89 426 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 SMPD4Q9NXE4 827 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 CLIC5Q9NZA1 410 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 CA14Q9ULX7 337 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 MYO10Q9HD67 2058 aa14.73□□□□□ -0.05
GTF3C3-206ENST00000448539 PIK3R2O00459 728 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 STK25O00506 426 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 CHADO15335 359 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 CBFA2T2O43439 604 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 OLFM2O95897 454 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 TCF3P15923 654 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 JAM2P57087 298 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 GOLGA8FQ08AF8 430 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 GOLGA8DPQ0D2H9 430 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 MTF1Q14872 753 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 TAF3Q5VWG9 929 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 SCD5Q86SK9 330 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 ZNF677Q86XU0 584 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 SIX5Q8N196 739 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 SCML4Q8N228 414 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 TMEM35BQ8NCS4 154 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 IRGQQ8WZA9 623 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 DNASE1L2Q92874 299 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 MIS12Q9H081 205 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 LHX5Q9H2C1 402 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 SYNCQ9H7C4 482 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 CYLDQ9NQC7 956 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 IFNKQ9P0W0 207 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 DNMT3LQ9UJW3 386 aa14.72□□□□□ -0.05
GTF3C3-206ENST00000448539 LEFTY2O00292 366 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 SART1O43290 800 aaKnown RBP14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 IFNAR2P48551 515 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 PGFP49763 221 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 KPNA1P52294 538 aaPredicted RBP14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 ARID5AQ03989 594 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 USP4Q13107 963 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 PDCLQ13371 301 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 ZNF77Q15935 545 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 SLC44A4Q53GD3 710 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 KLHDC10Q6PID8 442 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 IPO4Q8TEX9 1081 aaKnown RBP14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 RNF139Q8WU17 664 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 NDRG1Q92597 394 aaKnown RBP14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 PBXIP1Q96AQ6 731 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 SHDQ96IW2 340 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 LRRC3BQ96PB8 259 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 NUP58Q9BVL2 599 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 ARHGEF3Q9NR81 526 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 GKN1Q9NS71 199 aa14.71□□□□□ -0.05
GTF3C3-206ENST00000448539 OSER1Q9NX31 292 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms