RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 MYRFLQ96LU7 910 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 TTLL2Q9BWV7 592 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 ATXN3LQ9H3M9 355 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 NHEJ1Q9H9Q4 299 aaPredicted RBP12.18□□□□□ -0.46
LINC00408-201ENST00000447784 CYLDQ9NQC7 956 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 CNGB3Q9NQW8 809 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 HCFC1R1Q9NWW0 138 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 ADAMTS1Q9UHI8 967 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 DUSP12Q9UNI6 340 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 PLXNA3P51805 1871 aa12.18□□□□□ -0.46
LINC00408-201ENST00000447784 VWA8A3KMH1 1905 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 FAM170AA1A519 330 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TMCO5BA8MYB1 307 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 HAX1O00165 279 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 PIK3R2O00459 728 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
LINC00408-201ENST00000447784 CALB1P05937 261 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 USP17L7P0C7H9 530 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 HMGA1P17096 107 aaKnown RBP12.17□□□□□ -0.46
LINC00408-201ENST00000447784 EPHA5P54756 1037 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 USP46P62068 366 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 NOMO3P69849 1222 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 WDR59Q6PJI9 974 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 GPRIN1Q7Z2K8 1008 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TADA2BQ86TJ2 420 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TMEM110Q86TL2 294 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 MON1AQ86VX9 555 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 ZDHHC17Q8IUH5 632 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TMTC1Q8IUR5 882 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SCUBE3Q8IX30 993 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SLC44A3Q8N4M1 653 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SLC30A5Q8TAD4 765 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 ITFG1Q8TB96 612 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 OVCA2Q8WZ82 227 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 IRGQQ8WZA9 623 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 PBXIP1Q96AQ6 731 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 CPXM1Q96SM3 734 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 PCDHB18PQ96TA0 734 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 BAG1Q99933 345 aaPredicted RBP12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TRIM62Q9BVG3 475 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 ULBP1Q9BZM6 244 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 NACA2Q9H009 215 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 KCNH6Q9H252 994 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SLITRK6Q9H5Y7 841 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 TLR8Q9NR97 1041 aaKnown RBP12.17□□□□□ -0.46
LINC00408-201ENST00000447784 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 ADAM22Q9P0K1 906 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 CHORDC1Q9UHD1 332 aaPredicted RBP12.17□□□□□ -0.46
LINC00408-201ENST00000447784 STRIP2Q9ULQ0 834 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SCML2Q9UQR0 700 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 HCN4Q9Y3Q4 1203 aa12.17□□□□□ -0.46
LINC00408-201ENST00000447784 SCN1AP35498 2009 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 A0A1W2PRU2 124 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 E5RJQ4 531 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 PLEKP08567 350 aaPredicted RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 RALAP11233 206 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 GZMAP12544 262 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 UNGP13051 313 aaPredicted RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 MMP8P22894 467 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CYLC1P35663 651 aaPredicted RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 PSEN1P49768 467 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CENPCQ03188 943 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 HTR4Q13639 388 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 SPA17Q15506 151 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 PRSS36Q5K4E3 855 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CCDC122Q5T0U0 273 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 OR6B2Q6IFH4 312 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 MMS22LQ6ZRQ5 1243 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 TOGARAM2Q6ZUX3 1019 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 MTSS1LQ765P7 747 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 PHF13Q86YI8 300 aaPredicted RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 NPAS3Q8IXF0 933 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CCDC170Q8IYT3 715 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 FBXL6Q8N531 539 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 RNF139Q8WU17 664 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 TRIM11Q96F44 468 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CDK5RAP1Q96SZ6 601 aaKnown RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CHP1Q99653 195 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 C11orf70Q9BRQ4 267 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 SYT11Q9BT88 431 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 ZNF334Q9HCZ1 680 aaPredicted RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 LUC7LQ9NQ29 371 aaKnown RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 IL37Q9NZH6 218 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 GMIPQ9P107 970 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 WDR35Q9P2L0 1181 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 CYTH4Q9UIA0 394 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 ZMYM5Q9UJ78 669 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 USP3Q9Y6I4 520 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 PDCD11Q14690 1871 aaKnown RBP12.16□□□□□ -0.46
LINC00408-201ENST00000447784 DENND4AQ7Z401 1863 aa12.16□□□□□ -0.46
LINC00408-201ENST00000447784 A0A087X0T9 212 aa12.15□□□□□ -0.46
LINC00408-201ENST00000447784 ANKRD62A6NC57 917 aa12.15□□□□□ -0.46
LINC00408-201ENST00000447784 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
LINC00408-201ENST00000447784 CAPN9O14815 690 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms