RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 MED15Q96RN5 788 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TMEM106CQ9BVX2 250 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TRPC7Q9HCX4 862 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ATXN10Q9UBB4 475 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 SUPT7LO94864 414 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 NCKAP1LP55160 1127 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 MCL1Q07820 350 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 EPC2Q52LR7 807 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 BTBD8Q5XKL5 378 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 C11orf63Q6NUN7 778 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 PKN3Q6P5Z2 889 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 ZNF571Q7Z3V5 609 aaPredicted RBP19.22■□□□□ 0.67
SHANK3-203ENST00000445220 USP33Q8TEY7 942 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 OSCP1Q8WVF1 389 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 TCF7L2Q9NQB0 619 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 RRN3Q9NYV6 651 aa19.22■□□□□ 0.67
SHANK3-203ENST00000445220 NR3C2P08235 984 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 RPL5P46777 297 aaKnown RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 ITGADQ13349 1161 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 TFDP3Q5H9I0 405 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 ZNF75CPQ92670 426 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 SENP2Q9HC62 589 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 OSGEPQ9NPF4 335 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 PRPF4O43172 522 aaKnown RBP eCLIP19.21■□□□□ 0.671e-6■■■■□ 19.5
SHANK3-203ENST00000445220 CBFA2T3O75081 653 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 TGM2P21980 687 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 TDRD5Q8NAT2 981 aaKnown RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 TCP10LQ8TDR4 215 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 DEPDC7Q96QD5 511 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 HACL1Q9UJ83 578 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 PKP3Q9Y446 797 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 MAP3K13O43283 966 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 ARIH2O95376 493 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 CENPLQ8N0S6 344 aaPredicted RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 CCDC130P13994 396 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 CHRNA5P30532 468 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 RPL10AP62906 217 aaKnown RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 ANGPT1Q15389 498 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 ERMARDQ5T6L9 678 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 SH3TC2Q8TF17 1288 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 KLHL3Q9UH77 587 aa19.21■□□□□ 0.67
SHANK3-203ENST00000445220 RPL26L1Q9UNX3 145 aaKnown RBP19.21■□□□□ 0.67
SHANK3-203ENST00000445220 SOAT2O75908 522 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 LCA5LO95447 670 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 TXNP10599 105 aaKnown RBP19.21■□□□□ 0.66
SHANK3-203ENST00000445220 ME2P23368 584 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 FAXCQ5TGI0 409 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 RORBQ92753 470 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 LENG1Q96BZ8 264 aaPredicted RBP19.21■□□□□ 0.66
SHANK3-203ENST00000445220 MXRA8Q9BRK3 442 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 CLEC4MQ9H2X3 399 aaPredicted RBP19.21■□□□□ 0.66
SHANK3-203ENST00000445220 ADAM30Q9UKF2 790 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 SHOC2Q9UQ13 582 aa19.21■□□□□ 0.66
SHANK3-203ENST00000445220 SDR42E2A6NKP2 422 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 SNTNA6NMZ2 147 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 KCNJ2P63252 427 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 RNF43Q68DV7 783 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 SMARCAD1Q9H4L7 1026 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 STARD13Q9Y3M8 1113 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 OPLAHO14841 1288 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 GTF2H1P32780 548 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 RPL21P46778 160 aaKnown RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 POU4F1Q01851 419 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 ARMC3Q5W041 872 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 LINC00523Q86TU6 105 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 EXD1Q8NHP7 514 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 CKAP2Q8WWK9 683 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 BDH2Q9BUT1 245 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 C6orf62Q9GZU0 229 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.2■□□□□ 0.661e-8■□□□□ 9
SHANK3-203ENST00000445220 THAP1Q9NVV9 213 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 KBTBD4Q9NVX7 518 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 CACNA2D2Q9NY47 1150 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 GNL1P36915 607 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 IL5RAQ01344 420 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 NDUFA5Q16718 116 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 MICALL2Q8IY33 904 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 FNIP1Q8TF40 1166 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 GTF3C2Q8WUA4 911 aaPredicted RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 VPS33AQ96AX1 596 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 ATXN2Q99700 1313 aaKnown RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 KRT87PA6NCN2 255 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 MAGEB2O15479 319 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 SERPINE1P05121 402 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 KRT20P35900 424 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 NR1H2P55055 460 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 PURAQ00577 322 aaKnown RBP19.2■□□□□ 0.66
SHANK3-203ENST00000445220 NCF4Q15080 339 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 TMEM63BQ5T3F8 832 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 MREGQ8N565 214 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 APOPT1Q96IL0 206 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 ANKEF1Q9NU02 776 aa19.2■□□□□ 0.66
SHANK3-203ENST00000445220 MEI4A8MW99 385 aa19.19■□□□□ 0.66
SHANK3-203ENST00000445220 RBP5P82980 135 aa19.19■□□□□ 0.66
SHANK3-203ENST00000445220 RNF219Q5W0B1 726 aaPredicted RBP19.19■□□□□ 0.66
SHANK3-203ENST00000445220 DHFR2Q86XF0 187 aa19.19■□□□□ 0.66
SHANK3-203ENST00000445220 TFB1MQ8WVM0 346 aaKnown RBP19.19■□□□□ 0.66
SHANK3-203ENST00000445220 CAPSLQ8WWF8 208 aa19.19■□□□□ 0.66
SHANK3-203ENST00000445220 OLFM1Q99784 485 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms