RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 TRIM72Q6ZMU5 477 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 PARS2Q7L3T8 475 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 MRPL10Q7Z7H8 261 aaKnown RBP3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 FAM90A1Q86YD7 464 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 CBARPQ8N350 705 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 C8orf58Q8NAV2 365 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 C3orf20Q8ND61 904 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 SPATA3Q8NHX4 192 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 KAT5Q92993 513 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 SH2D3AQ9BRG2 576 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 FSD1LQ9BXM9 530 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 TINAGL1Q9GZM7 467 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 WDCPQ9H6R7 721 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 SERHLQ9NQF3 203 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 DUSP22Q9NRW4 184 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 BTAF1O14981 1849 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 AKAP12Q02952 1782 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 IFT172Q9UG01 1749 aa3.3□□□□□ -1.88
R3HDM1-207ENST00000436436 KAT6BQ8WYB5 2073 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 ACEP12821 1306 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 KCNU1A8MYU2 1149 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 SOCS2O14508 198 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 SLC16A6O15403 523 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 BCAR3O75815 825 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 TJP3O95049 919 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 MMP10P09238 476 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 NPSP0C0P6 89 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 PPIFP30405 207 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 IARSP41252 1262 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 TOB1P50616 345 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 DSC2Q02487 901 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 FAM50AQ14320 339 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 TBC1D25Q3MII6 688 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 FAM160B1Q5W0V3 765 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 MTHFD1LQ6UB35 978 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 MAVSQ7Z434 540 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 USP37Q86T82 979 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 CHSY1Q86X52 802 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 ZDHHC17Q8IUH5 632 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 SAMD14Q8IZD0 417 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 PNLDC1Q8NA58 520 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 PRSS3P2Q8NHM4 247 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 DAZAP1Q96EP5 407 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 ZNF580Q9UK33 172 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 ADAMTS5Q9UNA0 930 aa3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 TNRC6CQ9HCJ0 1690 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-207ENST00000436436 PPIP5K1Q6PFW1 1433 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 SPATA31E1Q6ZUB1 1445 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 VIRMAQ69YN4 1812 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 COL18A1P39060 1754 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 NSD2O96028 1365 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CNTNAP2Q9UHC6 1331 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 SHTN1A0MZ66 631 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 ANKRD62A6NC57 917 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 E5RJQ4 531 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 XPOTO43592 962 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA12O60330 932 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 VPS4BO75351 444 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 KIF20AO95235 890 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CHRM5P08912 532 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 ATXN1LP0C7T5 689 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CHRM3P20309 590 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 LIPAP38571 399 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CYP4F2P78329 520 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 ZNF260Q3ZCT1 412 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CERKLQ49MI3 558 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 TREML2Q5T2D2 321 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 MIS18BP1Q6P0N0 1132 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 TMEM108Q6UXF1 575 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 CERS3Q8IU89 383 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 FAM167AQ96KS9 214 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 TEKT5Q96M29 485 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 C5orf34Q96MH7 638 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 SPRTNQ9H040 489 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 AGAP1Q9UPQ3 857 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA9Q9Y5G4 932 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA8Q9Y5G5 932 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA7Q9Y5G6 932 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA6Q9Y5G7 932 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 PCDHGA3Q9Y5H0 932 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 TRPM1Q7Z4N2 1603 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 LAMA3Q16787 3333 aa3.28□□□□□ -1.88
R3HDM1-207ENST00000436436 KNDC1Q76NI1 1749 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 POLR3AO14802 1390 aaPredicted RBP3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 CCDC7Q96M83 1385 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 POC1B-GALNT4F8VUJ3 575 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 UBE2Q2LH0YL09 131 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 USP1O94782 785 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 MT-CO1P00395 513 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 FGBP02675 491 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 PDHA1P08559 390 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 DLDP09622 509 aaKnown RBP3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 ENGP17813 658 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 CCKARP32238 428 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 LOXL3P58215 753 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 RABEP1Q15276 862 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 UAP1L1Q3KQV9 507 aa3.27□□□□□ -1.89
R3HDM1-207ENST00000436436 SYDE2Q5VT97 1194 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms