RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ONECUT2O95948 504 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 PRKCBP05771 671 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 PYGLP06737 847 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 TMEM225BP0DP42 221 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 PPP3CBP16298 524 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 NTSR1P30989 418 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 PTGS2P35354 604 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 TIRAPP58753 221 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 NFIXQ14938 502 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 MAPRE1Q15691 268 aaKnown RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 ZNF618Q5T7W0 954 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 LCNL1Q6ZST4 164 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 LRRTM4Q86VH4 590 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 C1orf210Q8IVY1 113 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 PPHLN1Q8NEY8 458 aaKnown RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 PGBD1Q96JS3 809 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 SEC62Q99442 399 aaKnown RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 EIF2AK1Q9BQI3 630 aaKnown RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 ALG8Q9BVK2 526 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 VPS51Q9UID3 782 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 ST6GALNAC2Q9UJ37 374 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 SLC27A6Q9Y2P4 619 aa6.8□□□□□ -1.32
USP54-206ENST00000433394 ARID1BQ8NFD5 2236 aaPredicted RBP6.8□□□□□ -1.32
USP54-206ENST00000433394 H0Y3Z8 333 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 KIAA0355O15063 1070 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 FAM155BO75949 473 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 WDR47O94967 919 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 DLDP09622 509 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 SRGNP10124 158 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 GATA3P23771 443 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 LIPAP38571 399 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 EIF4A1P60842 406 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 EIF2B5Q13144 721 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 TRPC3Q13507 836 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 CBFBQ13951 182 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 BTBD16Q32M84 506 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 LCE1DQ5T752 114 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 INTS11Q5TA45 600 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 SLC9A4Q6AI14 798 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 LVRNQ6Q4G3 990 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 CAND1Q86VP6 1230 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 P3H2Q8IVL5 708 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 C11orf44Q8N8P7 122 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 IL17REQ8NFR9 667 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 SLC30A5Q8TAD4 765 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 SUN3Q8TAQ9 357 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 HMGB4Q8WW32 186 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 XAGE5Q8WWM1 108 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 FKBP10Q96AY3 582 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 NACC2Q96BF6 587 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 RSPRY1Q96DX4 576 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 MYEOVQ96EZ4 313 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 KLC2Q9H0B6 622 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 CD248Q9HCU0 757 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 LIN7CQ9NUP9 197 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 FBXO28Q9NVF7 368 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 LPAR3Q9UBY5 353 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 GJD2Q9UKL4 321 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 CRYL1Q9Y2S2 319 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 RRP7AQ9Y3A4 280 aaKnown RBP6.79□□□□□ -1.32
USP54-206ENST00000433394 COL15A1P39059 1388 aa6.79□□□□□ -1.32
USP54-206ENST00000433394 A1L4Q6 167 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 MARCH11A6NNE9 402 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 PRRT4C9JH25 899 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 SEPT4O43236 478 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 ORC4O43929 436 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 PPP6R2O75170 966 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 TK1P04183 234 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 RXRAP19793 462 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 DRD1P21728 446 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 KLRK1P26718 216 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 SERPINA4P29622 427 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 KRT9P35527 623 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 ATXN1P54253 815 aaKnown RBP6.78□□□□□ -1.32
USP54-206ENST00000433394 PDE1AP54750 535 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 TPTEP56180 551 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 TLE2Q04725 743 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 CUL4BQ13620 913 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 SLC12A1Q13621 1099 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 ANKRD1Q15327 319 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 TBRG1Q3YBR2 411 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 PLAC9Q5JTB6 97 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 RRAGAQ7L523 313 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 OVCA2Q8WZ82 227 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 GLG1Q92896 1179 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 FAR2Q96K12 515 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 ZNF768Q9H5H4 540 aaKnown RBP6.78□□□□□ -1.32
USP54-206ENST00000433394 PRDM16Q9HAZ2 1276 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 FEM1BQ9UK73 627 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 RIMKLBQ9ULI2 386 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 SH2B3Q9UQQ2 575 aa6.78□□□□□ -1.32
USP54-206ENST00000433394 A0A1B0GVC2 190 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 PEX1O43933 1283 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 KRT38O76015 456 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 ZFPL1O95159 310 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 ZNF37AP17032 561 aaPredicted RBP6.77□□□□□ -1.33
USP54-206ENST00000433394 MMP8P22894 467 aa6.77□□□□□ -1.33
USP54-206ENST00000433394 CNTFP26441 200 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms