RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 KIF19Q2TAC6 998 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 CACTIN-AS1Q8N1I8 211 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 PDCL2Q8N4E4 241 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 KCTD17Q8N5Z5 321 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 CD248Q9HCU0 757 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 SPHK2Q9NRA0 654 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 MAGEC2Q9UBF1 373 aaPredicted RBP16.83■□□□□ 0.28
NUP50-209ENST00000432340 IL17BQ9UHF5 180 aa16.83■□□□□ 0.28
NUP50-209ENST00000432340 CITO14578 2027 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 A0A0B4J269 797 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 PAPSS1O43252 624 aaPredicted RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 FAM189A1O60320 539 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 SYNCRIPO60506 623 aaKnown RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 ACADMP11310 421 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 CSNK1EP49674 416 aaKnown RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 PCBP4P57723 403 aaKnown RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 BNC1Q01954 994 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 ILKQ13418 452 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 ECM1Q16610 540 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 TDRD10Q5VZ19 366 aaKnown RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 PRICKLE2Q7Z3G6 844 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 PRCCQ92733 491 aaPredicted RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 SKA1Q96BD8 255 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 TTLL2Q9BWV7 592 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 HAPLN2Q9GZV7 340 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 DNAJC17Q9NVM6 304 aaKnown RBP16.82■□□□□ 0.28
NUP50-209ENST00000432340 WDR35Q9P2L0 1181 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 ANKRD6Q9Y2G4 727 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 PTPRBP23467 1997 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 PTPRDP23468 1912 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 ADAMTS9Q9P2N4 1935 aa16.82■□□□□ 0.28
NUP50-209ENST00000432340 E9PMD0 336 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 WNT7AO00755 349 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 ENC1O14682 589 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 BRINP1O60477 761 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 OAS1P00973 400 aaKnown RBP16.81■□□□□ 0.28
NUP50-209ENST00000432340 PIGRP01833 764 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 NOP14P78316 857 aaKnown RBP16.81■□□□□ 0.28
NUP50-209ENST00000432340 HES3Q5TGS1 186 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 SLFN12LQ6IEE8 588 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 MIB1Q86YT6 1006 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 LSMEM2Q8N112 164 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 SNX19Q92543 992 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 SIPA1Q96FS4 1042 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
NUP50-209ENST00000432340 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 FAM117AQ9C073 453 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 RNF38Q9H0F5 515 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 PDRG1Q9NUG6 133 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
NUP50-209ENST00000432340 SNX11Q9Y5W9 270 aa16.81■□□□□ 0.28
NUP50-209ENST00000432340 MYO16Q9Y6X6 1858 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 SCAMP3O14828 347 aaKnown RBP16.8■□□□□ 0.28
NUP50-209ENST00000432340 YKT6O15498 198 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 PFKFB2O60825 505 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 LDOC1O95751 146 aaPredicted RBP16.8■□□□□ 0.28
NUP50-209ENST00000432340 IGLV3-19P01714 112 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 ACAT1P24752 427 aaKnown RBP16.8■□□□□ 0.28
NUP50-209ENST00000432340 ADSSP30520 456 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 TPMTP51580 245 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 ADAT2Q7Z6V5 191 aaKnown RBP16.8■□□□□ 0.28
NUP50-209ENST00000432340 ERICH1Q86X53 443 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 TOP6BLQ8N6T0 577 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 C1orf216Q8TAB5 229 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 ZNF578Q96N58 590 aaPredicted RBP16.8■□□□□ 0.28
NUP50-209ENST00000432340 ACOX2Q99424 681 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 PKMYT1Q99640 499 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.8■□□□□ 0.28
NUP50-209ENST00000432340 RAD54BQ9Y620 910 aa16.8■□□□□ 0.28
NUP50-209ENST00000432340 PYCARD-AS1I3L0S3 204 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
NUP50-209ENST00000432340 CACNG3O60359 315 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 IL18RAPO95256 599 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 NCKAP1LP55160 1127 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 LY6DQ14210 128 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 ZNF174Q15697 407 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 COLEC12Q5KU26 742 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 ARHGAP40Q5TG30 622 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 ZNF574Q6ZN55 896 aaPredicted RBP16.79■□□□□ 0.28
NUP50-209ENST00000432340 UCMAQ8WVF2 138 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 CNDP2Q96KP4 475 aaKnown RBP16.79■□□□□ 0.28
NUP50-209ENST00000432340 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
NUP50-209ENST00000432340 USP9XQ93008 2570 aaPredicted RBP16.78■□□□□ 0.28
NUP50-209ENST00000432340 C21orf59P57076 290 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 FUT11Q495W5 492 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 FAM171BQ6P995 826 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 TMPRSS6Q8IU80 811 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 ADGRF2Q8IZF7 708 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 CACTINQ8WUQ7 758 aaKnown RBP16.78■□□□□ 0.28
NUP50-209ENST00000432340 OVCA2Q8WZ82 227 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 ZFRQ96KR1 1074 aaKnown RBP16.78■□□□□ 0.28
NUP50-209ENST00000432340 NACA2Q9H009 215 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 SLC6A17Q9H1V8 727 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 CD93Q9NPY3 652 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 HCN2Q9UL51 889 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 CDH9Q9ULB4 789 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 CLCA2Q9UQC9 943 aa16.78■□□□□ 0.28
NUP50-209ENST00000432340 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms