RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CHMLP26374 656 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ANXA13P27216 316 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 LRPAP1P30533 357 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 LSSP48449 732 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 BCAT1P54687 386 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ST3GAL1Q11201 340 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ORC1Q13415 861 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 SKIDA1Q1XH10 827 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 FUT11Q495W5 492 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 CREB3L3Q68CJ9 461 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ATCAYQ86WG3 371 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 TMPRSS6Q8IU80 811 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 SRRM1Q8IYB3 904 aaKnown RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ZSCAN1Q8NBB4 408 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 SNRNP27Q8WVK2 155 aaKnown RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 BICD1Q96G01 975 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 TRMT2BQ96GJ1 504 aaKnown RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 XPO6Q96QU8 1125 aaKnown RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 CCNL2Q96S94 520 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ELF4Q99607 663 aaPredicted RBP6.77□□□□□ -1.33
SDCBP-203ENST00000424270 GABRG3Q99928 467 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 NACA2Q9H009 215 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 EPN3Q9H201 632 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 ITM2CQ9NQX7 267 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 SH3GLB2Q9NR46 395 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 AASDHPPTQ9NRN7 309 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 GCNT4Q9P109 453 aa6.77□□□□□ -1.33
SDCBP-203ENST00000424270 A1L4Q6 167 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 FAM47DPA6NHR8 397 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 KCNJ18B7U540 433 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 WASH3PC4AMC7 463 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 NEDD8-MDP1E9PL57 170 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 YKT6O15498 198 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SGSM2O43147 1006 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 CYP26A1O43174 497 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 CSO75390 466 aaKnown RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 IRF1P10914 325 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 TCF3P15923 654 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 POU3F2P20265 443 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 CYP3A5P20815 502 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 TNFRSF8P28908 595 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 TXKP42681 527 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 CTSKP43235 329 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 AARSP49588 968 aaKnown RBP eCLIP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 PEX3P56589 373 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 LILRA4P59901 499 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 FOXK1P85037 733 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 ARID5AQ03989 594 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 IFRD2Q12894 506 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 HDAC1Q13547 482 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SAFBQ15424 915 aaKnown RBP eCLIP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 CALCRLQ16602 461 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SLC10A6Q3KNW5 377 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 LINC00303Q3SY05 128 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 PIK3AP1Q6ZUJ8 805 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 LRRTM3Q86VH5 581 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 GANCQ8TET4 914 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 HAS1Q92839 578 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 KIFAP3Q92845 792 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 GTF3C6Q969F1 213 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SGF29Q96ES7 293 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 RNF26Q9BY78 433 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SLC25A18Q9H1K4 315 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 OSBPL2Q9H1P3 480 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 C6orf106Q9H6K1 298 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 KMT5AQ9NQR1 393 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 GDF3Q9NR23 364 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 USP36Q9P275 1121 aaKnown RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-203ENST00000424270 SLCO1B1Q9Y6L6 691 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 STON1Q9Y6Q2 735 aa6.76□□□□□ -1.33
SDCBP-203ENST00000424270 PPEF2O14830 753 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 TRIM24O15164 1050 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 CLDN3O15551 220 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 SEMA4FO95754 770 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 ITGB2P05107 769 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 XRCC6P12956 609 aaKnown RBP eCLIP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 CYP11B2P19099 503 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 PAX3P23760 479 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 CD27P26842 260 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 DGKGP49619 791 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 RCAN1P53805 252 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 CDH8P55286 799 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 SSRP1Q08945 709 aaKnown RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 ARL13BQ3SXY8 428 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 KCNT1Q5JUK3 1230 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 WSCD1Q658N2 575 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 METTL3Q86U44 580 aaKnown RBP6.75□□□□□ -1.33
SDCBP-203ENST00000424270 PHTF2Q8N3S3 785 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 ARL14Q8N4G2 192 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 SPATA20Q8TB22 786 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 UCMAQ8WVF2 138 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 BHMTQ93088 406 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 HPS3Q969F9 1004 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 BIRC7Q96CA5 298 aa6.75□□□□□ -1.33
SDCBP-203ENST00000424270 MOCOSQ96EN8 888 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms