RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 ASCL3Q9NQ33 180 aa12.77□□□□□ -0.37
UFD1-203ENST00000421968 PCDHA12Q9UN75 941 aa12.77□□□□□ -0.37
UFD1-203ENST00000421968 TP53BP1Q12888 1972 aaPredicted RBP12.77□□□□□ -0.37
UFD1-203ENST00000421968 F8P00451 2351 aa12.77□□□□□ -0.37
UFD1-203ENST00000421968 CCDC169A6NNP5 214 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 ABLIM1O14639 778 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 XPOTO43592 962 aaKnown RBP12.76□□□□□ -0.37
UFD1-203ENST00000421968 USP12O75317 370 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 CKMT2P17540 419 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 CYP2F1P24903 491 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 C21orf59P57076 290 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 SLC7A9P82251 487 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 ANO4Q32M45 955 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 GRAMD4Q6IC98 578 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 TMPRSS6Q8IU80 811 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 SCFD1Q8WVM8 642 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 CCDC97Q96F63 343 aaPredicted RBP12.76□□□□□ -0.37
UFD1-203ENST00000421968 SIPA1Q96FS4 1042 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 ELF4Q99607 663 aaPredicted RBP12.76□□□□□ -0.37
UFD1-203ENST00000421968 SEMA3CQ99985 751 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 PCED1AQ9H1Q7 454 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
UFD1-203ENST00000421968 PLEKHA5Q9HAU0 1116 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 WDR70Q9NW82 654 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 TBC1D14Q9P2M4 693 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.76□□□□□ -0.37
UFD1-203ENST00000421968 PHLPP2Q6ZVD8 1323 aa12.76□□□□□ -0.37
UFD1-203ENST00000421968 ARHGEF35A5YM69 484 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 GFRA2O00451 464 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 CYB561D2O14569 222 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 HOXC11O43248 304 aaPredicted RBP12.75□□□□□ -0.37
UFD1-203ENST00000421968 TRAK2O60296 914 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 PPFIA2O75334 1257 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 ACADMP11310 421 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 PFKLP17858 780 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 PAX3P23760 479 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 E2F1Q01094 437 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 TSPY1Q01534 308 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 ST3GAL1Q11201 340 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 NTRK3Q16288 839 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 NFE2Q16621 373 aaPredicted RBP12.75□□□□□ -0.37
UFD1-203ENST00000421968 SAP25Q8TEE9 199 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 PRCCQ92733 491 aaPredicted RBP12.75□□□□□ -0.37
UFD1-203ENST00000421968 NAP1L4Q99733 375 aaKnown RBP12.75□□□□□ -0.37
UFD1-203ENST00000421968 RNF38Q9H0F5 515 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 EPN3Q9H201 632 aa12.75□□□□□ -0.37
UFD1-203ENST00000421968 SCN1AP35498 2009 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 TTC26A0AVF1 554 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 PRRT4C9JH25 899 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 IGLV3-19P01714 112 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 PPP2R3AQ06190 1150 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 NOLC1Q14978 699 aaKnown RBP eCLIP12.74□□□□□ -0.37
UFD1-203ENST00000421968 NECTIN1Q15223 517 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 NPY5RQ15761 445 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 TTC22Q5TAA0 569 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 WSCD1Q658N2 575 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 USP53Q70EK8 1073 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 CACUL1Q86Y37 369 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 KIFAP3Q92845 792 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
UFD1-203ENST00000421968 PYM1Q9BRP8 204 aaKnown RBP12.74□□□□□ -0.37
UFD1-203ENST00000421968 ACE2Q9BYF1 805 aaPredicted RBP12.74□□□□□ -0.37
UFD1-203ENST00000421968 LSG1Q9H089 658 aaKnown RBP12.74□□□□□ -0.37
UFD1-203ENST00000421968 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
UFD1-203ENST00000421968 TRPM5Q9NZQ8 1165 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 TCHHQ07283 1943 aa12.74□□□□□ -0.37
UFD1-203ENST00000421968 ITGB2P05107 769 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 SPATA31C1P0DKV0 1188 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 IFNAR1P17181 557 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 TNFRSF8P28908 595 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 RBMS1P29558 406 aaKnown RBP12.73□□□□□ -0.37
UFD1-203ENST00000421968 SHBQ15464 509 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 C9orf57Q5W0N0 161 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 GALNT17Q6IS24 598 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 TAS1R3Q7RTX0 852 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 DDX42Q86XP3 938 aaKnown RBP eCLIP12.73□□□□□ -0.37
UFD1-203ENST00000421968 TMEM25Q86YD3 366 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
UFD1-203ENST00000421968 OTUB2Q96DC9 234 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 ZNF768Q9H5H4 540 aaKnown RBP12.73□□□□□ -0.37
UFD1-203ENST00000421968 TMEM134Q9H6X4 195 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 SPHK2Q9NRA0 654 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 STON1Q9Y6Q2 735 aa12.73□□□□□ -0.37
UFD1-203ENST00000421968 RP1L1Q8IWN7 2480 aaPredicted RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 BSNQ9UPA5 3926 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 ZFHX3Q15911 3703 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 FSBPO95073 299 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 ABL1P00519 1130 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 CLTAP09496 248 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 MBL2P11226 248 aaPredicted RBP12.72□□□□□ -0.37
UFD1-203ENST00000421968 ACP1P24666 158 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 CD27P26842 260 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 MATR3P43243 847 aaKnown RBP eCLIP12.72□□□□□ -0.37
UFD1-203ENST00000421968 PEX3P56589 373 aa12.72□□□□□ -0.37
UFD1-203ENST00000421968 SKOR1P84550 965 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms