RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 NR1H3Q13133 447 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 DHCR24Q15392 516 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 PIGZQ86VD9 579 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 DDX42Q86XP3 938 aaKnown RBP eCLIP27.74■■■□□ 2.034e-7■■■□□ 19
VEGFA-207ENST00000413642 ARHGEF19Q8IW93 802 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 SYNPOQ8N3V7 929 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 SEMA4AQ9H3S1 761 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 RWDD2AQ9UIY3 292 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 PCDHGA2Q9Y5H1 932 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 K7ESF4 209 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 LILRB5O75023 590 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 RNF40O75150 1001 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 GNA14O95837 355 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 OPRD1P41143 372 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 MARSP56192 900 aaKnown RBP27.73■■■□□ 2.03
VEGFA-207ENST00000413642 RHBDF2Q6PJF5 856 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 RRAGAQ7L523 313 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 PPM1KQ8N3J5 372 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 ANKRD52Q8NB46 1076 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 EHBP1Q8NDI1 1231 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 KLF16Q9BXK1 252 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-207ENST00000413642 FAM124BQ9H5Z6 455 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-207ENST00000413642 CYLDQ9NQC7 956 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 SH3BP1Q9Y3L3 701 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 UTP18Q9Y5J1 556 aaKnown RBP eCLIP27.73■■■□□ 2.031e-11■□□□□ 9.4
VEGFA-207ENST00000413642 USP3Q9Y6I4 520 aa27.73■■■□□ 2.03
VEGFA-207ENST00000413642 E2F8A0AVK6 867 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 CHURC1-FNTBB4DL54 471 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 RNF225M0QZC1 329 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-207ENST00000413642 RARGP13631 454 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 TBXAS1P24557 533 aaPredicted RBP27.72■■■□□ 2.03
VEGFA-207ENST00000413642 SLC6A11P48066 632 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 FNTBP49356 437 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 YWHAEP62258 255 aaKnown RBP27.72■■■□□ 2.03
VEGFA-207ENST00000413642 TMEM270Q6UE05 265 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 CREBRFQ8IUR6 639 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 BBS7Q8IWZ6 715 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 SUMF1Q8NBK3 374 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 UBA3Q8TBC4 463 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 TFAP2BQ92481 460 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.72■■■□□ 2.03
VEGFA-207ENST00000413642 NAGPAQ9UK23 515 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 TSPAN16Q9UKR8 245 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 PCDHB4Q9Y5E5 795 aa27.72■■■□□ 2.03
VEGFA-207ENST00000413642 SLC9A3R1O14745 358 aaPredicted RBP27.71■■■□□ 2.03
VEGFA-207ENST00000413642 P4HA2O15460 535 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 AFPP02771 609 aaKnown RBP27.71■■■□□ 2.03
VEGFA-207ENST00000413642 DRD1P21728 446 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 PDE4CQ08493 712 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 SGO2Q562F6 1265 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 HEATR6Q6AI08 1181 aaKnown RBP27.71■■■□□ 2.03
VEGFA-207ENST00000413642 CCDC186Q7Z3E2 898 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 KIAA1958Q8N8K9 716 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 NDRG1Q92597 394 aaKnown RBP27.71■■■□□ 2.03
VEGFA-207ENST00000413642 ZSWIM1Q9BR11 485 aa27.71■■■□□ 2.03
VEGFA-207ENST00000413642 GREM1O60565 184 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 CCDC192P0DO97 292 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 ATP5C1P36542 298 aaKnown RBP27.7■■■□□ 2.02
VEGFA-207ENST00000413642 MESP2Q0VG99 397 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 CETN1Q12798 172 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 PPP2R5DQ14738 602 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 LY6G5CQ5SRR4 150 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 CLEC17AQ6ZS10 378 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 C12orf40Q86WS4 652 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 IRF2BP1Q8IU81 584 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 UBXN6Q9BZV1 441 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 INTS2Q9H0H0 1204 aaKnown RBP27.7■■■□□ 2.02
VEGFA-207ENST00000413642 LMBRD1Q9NUN5 540 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 TBC1D14Q9P2M4 693 aa27.7■■■□□ 2.02
VEGFA-207ENST00000413642 O00370 1275 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 VDRP11473 427 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 RAB41Q5JT25 222 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 C10orf120Q5SQS8 335 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 SFTPA1Q8IWL2 248 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 DCLK2Q8N568 766 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 MLKLQ8NB16 471 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 CNOT6LQ96LI5 555 aaKnown RBP27.69■■■□□ 2.02
VEGFA-207ENST00000413642 KREMEN1Q96MU8 473 aa27.69■■■□□ 2.02
VEGFA-207ENST00000413642 FAM126AQ9BYI3 521 aaPredicted RBP27.69■■■□□ 2.02
VEGFA-207ENST00000413642 HELZP42694 1942 aaKnown RBP27.69■■■□□ 2.02
VEGFA-207ENST00000413642 PAPSS2O95340 614 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-207ENST00000413642 FGFR1OPO95684 399 aaKnown RBP27.68■■■□□ 2.02
VEGFA-207ENST00000413642 PXNP49023 591 aaPredicted RBP27.68■■■□□ 2.02
VEGFA-207ENST00000413642 TKTL1P51854 596 aa27.68■■■□□ 2.02
VEGFA-207ENST00000413642 SRSF5Q13243 272 aaKnown RBP27.68■■■□□ 2.02
VEGFA-207ENST00000413642 NRLP54845 237 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 DPCR1Q3MIW9 517 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 TMEM25Q86YD3 366 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 RBBP8NLQ8NC74 664 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-207ENST00000413642 RPLP0P6Q8NHW5 317 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 ULBP1Q9BZM6 244 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 NUP62CLQ9H1M0 184 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 HESX1Q9UBX0 185 aa27.67■■■□□ 2.02
VEGFA-207ENST00000413642 K7EQS6 105 aa27.66■■■□□ 2.02
VEGFA-207ENST00000413642 XPO1O14980 1071 aaKnown RBP27.66■■■□□ 2.02
VEGFA-207ENST00000413642 PAEPP09466 180 aa27.66■■■□□ 2.02
VEGFA-207ENST00000413642 ADH5P11766 374 aa27.66■■■□□ 2.02
VEGFA-207ENST00000413642 BRD2P25440 801 aaKnown RBP27.66■■■□□ 2.02
VEGFA-207ENST00000413642 BCAT1P54687 386 aa27.66■■■□□ 2.02
VEGFA-207ENST00000413642 SEC13P55735 322 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms