RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 RIPK2O43353 540 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 DNAJC8O75937 253 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PRLRP16471 622 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TGM1P22735 817 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CCNE1P24864 410 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CYP2C18P33260 490 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SLC16A2P36021 539 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 QARSP47897 775 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PMS2P54278 862 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CACNB3P54284 484 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 AQP4P55087 323 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 IFITM2Q01629 132 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 OGDHQ02218 1023 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 KCNH2Q12809 1159 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CAMK2BQ13554 666 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CARTPTQ16568 116 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 FGD3Q5JSP0 725 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 IL31Q6EBC2 164 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 KANK3Q6NY19 840 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 KLHL17Q6TDP4 642 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 UGT2A3Q6UWM9 527 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 LCA5Q86VQ0 697 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PPFIBP1Q86W92 1011 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 JAMLQ86YT9 394 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 GABPB2Q8TAK5 448 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 WHAMMQ8TF30 809 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 UBLCP1Q8WVY7 318 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ACO2Q99798 780 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SLC29A1Q99808 456 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 RHNO1Q9BSD3 238 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 KLHL4Q9C0H6 718 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PCDH12Q9NPG4 1184 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 HELLSQ9NRZ9 838 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SLC27A5Q9Y2P5 690 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 COL6A6A6NMZ7 2263 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 JMJD1CQ15652 2540 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 DNAH1Q9P2D7 4330 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 LCHNA4D1U4 455 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 H3BNX3 289 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 H3BSA7 217 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CDKL5O76039 1030 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PDE5AO76074 875 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TMEM63AO94886 807 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PAPLNO95428 1278 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ASNSP08243 561 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 C6orf222P0C671 652 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 THRAP10827 490 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 HOXB8P17481 243 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CD68P34810 354 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NOP14P78316 857 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 GPM6BQ13491 265 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 RCN1Q15293 331 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CYP2A13Q16696 494 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 LETM2Q2VYF4 491 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MYLK3Q32MK0 819 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CRELD2Q6UXH1 353 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SCG3Q8WXD2 468 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 LOXL4Q96JB6 756 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF396Q96N95 335 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 RANBP9Q96S59 729 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ERP44Q9BS26 406 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CXCL16Q9H2A7 254 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 BTBD7Q9P203 1132 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 AASSQ9UDR5 926 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 FBXO10Q9UK96 956 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 USTQ9Y2C2 406 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 PCDHA8Q9Y5H6 950 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MRPL42Q9Y6G3 142 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 UBR5O95071 2799 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NBEAL2Q6ZNJ1 2754 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 KIAA1217Q5T5P2 1943 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 WNK1Q9H4A3 2382 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MUC6Q6W4X9 2439 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 COL4A2P08572 1712 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 FAM237BA0A1B0GVD1 139 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 DENND3A2RUS2 1198 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ZBTB14O43829 449 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 LILRB3O75022 631 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SLITRK3O94933 977 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NCAM1P13591 858 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CCNB1P14635 433 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NPR3P17342 541 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ATP6V1C1P21283 382 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NKX2-5P52952 324 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 CSE1LP55060 971 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MYBPC1Q00872 1141 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MAPK7Q13164 816 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 SPARCL1Q14515 664 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TAF5Q15542 800 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 N4BP2L1Q5TBK1 243 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 TRMT10BQ6PF06 316 aaKnown RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 MYLK4Q86YV6 388 aaPredicted RBP3.28□□□□□ -1.88
RGPD3-202ENST00000409886 HIPK4Q8NE63 616 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 ZNF398Q8TD17 642 aa3.28□□□□□ -1.88
RGPD3-202ENST00000409886 NXPE3Q969Y0 559 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms