RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GOLGA6L10A0A0M3HER8 536 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 MTMR11A4FU01 709 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 PRPSAP2O60256 369 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 DAB1O75553 588 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 ZMYND10O75800 440 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 TRUB2O95900 331 aaKnown RBP13.02□□□□□ -0.32
CHMP3-204ENST00000409727 KRT7P08729 469 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 NCAM1P13591 858 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 KRT10P13645 584 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 OR1D2P34982 312 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 CA8P35219 290 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 SCNN1AP37088 669 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 MATKP42679 507 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 HDAC4P56524 1084 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 ITIH3Q06033 890 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 ACAP1Q15027 740 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 MGAT5BQ3V5L5 792 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 LRRC38Q5VT99 294 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 C8orf74Q6P047 294 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.32
CHMP3-204ENST00000409727 MMGT1Q8N4V1 131 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 GPR161Q8N6U8 529 aaKnown RBP13.02□□□□□ -0.32
CHMP3-204ENST00000409727 EXD1Q8NHP7 514 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 ADAM32Q8TC27 787 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 HDAC7Q8WUI4 952 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 UBE2Q2Q8WVN8 375 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 AUTS2Q8WXX7 1259 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 UBXN6Q9BZV1 441 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 POPDC2Q9HBU9 364 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 GPATCH2LQ9NWQ4 482 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 SPG21Q9NZD8 308 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 CALCOCO1Q9P1Z2 691 aa13.02□□□□□ -0.32
CHMP3-204ENST00000409727 PTPRDP23468 1912 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 TBC1D4O60343 1298 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 EFEMP2O95967 443 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 SOD2P04179 222 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 RARAP10276 462 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 PCK1P35558 622 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 DUSP4Q13115 394 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 NME3Q13232 169 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 GPR17Q13304 367 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 CCDC70Q6NSX1 233 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 MFSD7Q6UXD7 560 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 FIBCD1Q8N539 461 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 KCTD6Q8NC69 237 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 FUBP3Q96I24 572 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 PNKPQ96T60 521 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 LBHD1Q9BQE6 289 aaPredicted RBP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 HTATIP2Q9BUP3 242 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 DDX23Q9BUQ8 820 aaKnown RBP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 CHST7Q9NS84 486 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 DDX56Q9NY93 547 aaKnown RBP13.02□□□□□ -0.33
CHMP3-204ENST00000409727 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
CHMP3-204ENST00000409727 WDR27A2RRH5 827 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 M0QYT0 321 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 TRIM66O15016 1216 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 VNN2O95498 520 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 LTFP02788 710 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 FYNP06241 537 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 CD48P09326 243 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 PTPN9P43378 593 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 ROR1Q01973 937 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 VSTM1Q6UX27 236 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 SPOCD1Q6ZMY3 1216 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 BHLHA9Q7RTU4 235 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 POLNQ7Z5Q5 900 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
CHMP3-204ENST00000409727 VPS52Q8N1B4 723 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 SPDYE1Q8NFV5 336 aaPredicted RBP13.01□□□□□ -0.33
CHMP3-204ENST00000409727 SLC7A14Q8TBB6 771 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 CALN1Q9BXU9 219 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 OSBPL8Q9BZF1 889 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 PNPLA8Q9NP80 782 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 MTUS1Q9ULD2 1270 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 STAP1Q9ULZ2 295 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 PCDHB12Q9Y5F1 795 aa13.01□□□□□ -0.33
CHMP3-204ENST00000409727 LCHNA4D1U4 455 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 SART1O43290 800 aaKnown RBP13□□□□□ -0.33
CHMP3-204ENST00000409727 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
CHMP3-204ENST00000409727 NOS2P35228 1153 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 CETN2P41208 172 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 GLUD2P49448 558 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 TUBB4BP68371 445 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 ADCY2Q08462 1091 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 SNX1Q13596 522 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 CLUL1Q15846 466 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 ZC3H12AQ5D1E8 599 aaKnown RBP13□□□□□ -0.33
CHMP3-204ENST00000409727 BSPRYQ5W0U4 402 aa13□□□□□ -0.33
CHMP3-204ENST00000409727 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
CHMP3-204ENST00000409727 ARCQ7LC44 396 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms