RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 MAPK10P53779 464 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 MTFR1Q15390 333 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 LRRC8BQ6P9F7 803 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 MYOCQ99972 504 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 AGPAT3Q9NRZ7 376 aa14.2□□□□□ -0.14
VAPA-202ENST00000400000 WDR19Q8NEZ3 1342 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 M0R3G1 203 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 EGFRP00533 1210 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 ALDH2P05091 517 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CCDC130P13994 396 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CCR4P51679 360 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CCDC103Q8IW40 242 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 LRRN4Q8WUT4 740 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 ZNF333Q96JL9 665 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PRPF18Q99633 342 aaKnown RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 A0A1W2PQC6 194 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 MEI4A8MW99 385 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CDH2P19022 906 aaPredicted RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 MYL6P60660 151 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PTGISQ16647 500 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 VPS37AQ8NEZ2 397 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 USP6NLQ92738 828 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CLPBQ9H078 707 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 C10orf88Q9H8K7 445 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 GEMIN4P57678 1058 aaKnown RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 ANTXR2P58335 489 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 HHIPL2Q6UWX4 724 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 UNC45BQ8IWX7 931 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 GLMNQ92990 594 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PARVBQ9HBI1 364 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PAPOLBQ9NRJ5 636 aaKnown RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 GRID1Q9ULK0 1009 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PRDM15P57071 1507 aaPredicted RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 IGF2BP3O00425 579 aaKnown RBP eCLIP14.19□□□□□ -0.14
VAPA-202ENST00000400000 BAIAP3O94812 1187 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 SERPINB9P50453 376 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 TKTL1P51854 596 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 TRAF2Q12933 501 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CACHD1Q5VU97 1274 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CAPRIN2Q6IMN6 1127 aaKnown RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 MTSS1LQ765P7 747 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 NECAB2Q7Z6G3 386 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 MYO1HQ8N1T3 1032 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 IL1RAPL1Q9NZN1 696 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 PSMD12O00232 456 aaPredicted RBP14.19□□□□□ -0.14
VAPA-202ENST00000400000 GJB6O95452 261 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 CAP2P40123 477 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 UGT3A1Q6NUS8 523 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 HAO1Q9UJM8 370 aa14.19□□□□□ -0.14
VAPA-202ENST00000400000 AGTP01019 485 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 ALBP02768 609 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 NCKAP1LP55160 1127 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 CCL23P55773 120 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 GJC2Q5T442 439 aaPredicted RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 ARRDC4Q8NCT1 418 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.18□□□□□ -0.14
VAPA-202ENST00000400000 CATSPER2Q96P56 530 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 POLG2Q9UHN1 485 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 IPPQ9Y573 584 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 ARHGAP31Q2M1Z3 1444 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 BFSP2Q13515 415 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 TYW3Q6IPR3 259 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 ZNF34Q8IZ26 560 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 SLC20A1Q8WUM9 679 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 TUT1Q9H6E5 874 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 TRPM5Q9NZQ8 1165 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 O00370 1275 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 TOMM70O94826 608 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 PON1P27169 355 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 FAM47E-STBD1D6RA91 191 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 GYPCP04921 128 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 SLC2A4P14672 509 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 HOXA7P31268 230 aaPredicted RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 KRT20P35900 424 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 CCNG1P51959 295 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 MARSP56192 900 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 SGCGQ13326 291 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 NFYCQ13952 458 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 UCMAQ8WVF2 138 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 FAR2Q96K12 515 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 TIPINQ9BVW5 301 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 SPACA6W5XKT8 324 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 NCAPD2Q15021 1401 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 RHOBTB3O94955 611 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 NR1I3Q14994 352 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 AGAP9Q5VTM2 703 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 MIEF1Q9NQG6 463 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 NSMCE4AQ9NXX6 385 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 A0A087X0T9 212 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 MSH3P20585 1137 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 GTF2E2P29084 291 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 CDH8P55286 799 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 OTUD4Q01804 1114 aaKnown RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 DNAJC14Q6Y2X3 702 aaPredicted RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 SETD3Q86TU7 594 aaPredicted RBP14.18□□□□□ -0.14
VAPA-202ENST00000400000 CYP4X1Q8N118 509 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 GRIN3AQ8TCU5 1115 aa14.18□□□□□ -0.14
VAPA-202ENST00000400000 PIK3R5Q8WYR1 880 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms