RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CREMQ03060 361 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 TCEAL5Q5H9L2 206 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 PACS1Q6VY07 963 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ENOSF1Q7L5Y1 443 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 FAM84BQ96KN1 310 aaPredicted RBP11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 CYLDQ9NQC7 956 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 MYBL2P10244 700 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 HOXC12P31275 282 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 HDAC4P56524 1084 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 WDR93Q6P2C0 686 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 FMO2Q99518 471 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 ZMYND12Q9H0C1 365 aa11.33□□□□□ -0.6
CACNA1C-216ENST00000399638 DRAP1Q14919 205 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 KRT31Q15323 416 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 AKT1S1Q96B36 256 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TUBGCP3Q96CW5 907 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TIMM13Q9Y5L4 95 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 IRS2Q9Y4H2 1338 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TPD52L2O43399 206 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 EPHB2P29323 1055 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ZSWIM7Q19AV6 140 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 GPC2Q8N158 579 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF655Q8N720 491 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ARMC7Q9H6L4 198 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TOMM70O94826 608 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ITGB6P18564 788 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 C1orf146Q5VVC0 180 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CYP20A1Q6UW02 462 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CD99L2Q8TCZ2 262 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CAAP1Q9H8G2 361 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 MRPL40Q9NQ50 206 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CYP26A1O43174 497 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TRIM13O60858 407 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 VPS26AO75436 327 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 UMPSP11172 480 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CYP2A6P11509 494 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 PGS1Q32NB8 556 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 SERPINA13PQ6UXR4 307 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 SPEF1Q9Y4P9 236 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC9A3R1O14745 358 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CCINQ13939 588 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 SIKE1Q9BRV8 207 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 TIPINQ9BVW5 301 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 GNG14A0A1W2PPG7 69 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 H7C1W4 665 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 DNTTP04053 509 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 CTCFP49711 727 aaPredicted RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 RAB27AP51159 221 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 GID8Q9NWU2 228 aa11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.32□□□□□ -0.6
CACNA1C-216ENST00000399638 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CCDC188H7C350 402 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 TULP2O00295 520 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 BIRC5O15392 142 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ITGALP20701 1170 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PTPN7P35236 360 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 USP11P51784 963 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ORC1Q13415 861 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PARGQ86W56 976 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RHOT1Q8IXI2 618 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SUN3Q8TAQ9 357 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 METTL5Q9NRN9 209 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ANKRD65E5RJM6 399 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 KIAA0391O15091 583 aaKnown RBP11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 RHOBTB3O94955 611 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PEX5P50542 639 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 FAXCQ5TGI0 409 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 HHIPL2Q6UWX4 724 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ICA1LQ8NDH6 482 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 OR10G6Q8NH81 332 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 PI4K2AQ9BTU6 479 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 FUT8Q9BYC5 575 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 ZNF536O15090 1300 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 GSTM1P09488 218 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 KLRC1P26715 233 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 BACE1P56817 501 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CHPFQ8IZ52 775 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 FAM136AQ96C01 138 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 CLPBQ9H078 707 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 MYLK2Q9H1R3 596 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 IL1RL2Q9HB29 575 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 KRT84Q9NSB2 600 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SERPINB3P29508 390 aa11.31□□□□□ -0.6
CACNA1C-216ENST00000399638 SEC13P55735 322 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms