RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.86
ATL3-201ENST00000398868 H2AFY2Q9P0M6 372 aaPredicted RBP9.65□□□□□ -0.86
ATL3-201ENST00000398868 SLC27A5Q9Y2P5 690 aa9.65□□□□□ -0.86
ATL3-201ENST00000398868 SHROOM2Q13796 1616 aa9.65□□□□□ -0.86
ATL3-201ENST00000398868 HEATR9A2RTY3 570 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 KRT87PA6NCN2 255 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 MEI4A8MW99 385 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 ADSLP30566 484 aaPredicted RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 CAV1Q03135 178 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 ZSWIM7Q19AV6 140 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 COMMD2Q86X83 199 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 CBWD2Q8IUF1 395 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 TTC13Q8NBP0 860 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 SLC38A7Q9NVC3 462 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 SYBUQ9NX95 663 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 RBMX2Q9Y388 322 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 LSM1O15116 133 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 MSH4O15457 936 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 RNASEH1O60930 286 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 GJB1P08034 283 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 GPD1P21695 349 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 DNAL1Q4LDG9 190 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 STYK1Q6J9G0 422 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 ZNF669Q96BR6 464 aaPredicted RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 INTS13Q9NVM9 706 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 DDX43Q9NXZ2 648 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 DDX56Q9NY93 547 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 POLG2Q9UHN1 485 aa9.65□□□□□ -0.87
ATL3-201ENST00000398868 FAM32AQ9Y421 112 aaKnown RBP9.65□□□□□ -0.87
ATL3-201ENST00000398868 MYPNQ86TC9 1320 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 GRID2IPA4D2P6 1211 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 PDZK1P1A8MUH7 402 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SLC25A27O95847 323 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 PSMC3P17980 439 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 WASP42768 502 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SLC11A2P49281 568 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SARSP49591 514 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 SLC39A12Q504Y0 691 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 CCNI2Q6ZMN8 369 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 TBC1D19Q8N5T2 526 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 CORO1BQ9BR76 489 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 CATSPERBQ9H7T0 1116 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 GJB6O95452 261 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 HPGDP15428 266 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 ATP2C1P98194 919 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 KCNB2Q92953 911 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 TRIM62Q9BVG3 475 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SNX12Q9UMY4 172 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 GSTM1P09488 218 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 MLNP12872 115 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 ALOX15P16050 662 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 PCSK1P29120 753 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 RPS7P62081 194 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 ARF5P84085 180 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 PTK7Q13308 1070 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 IZUMO2Q6UXV1 221 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 DLK2Q6UY11 383 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 METTL16Q86W50 562 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 FMR1NBQ8N0W7 255 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 SPATA16Q9BXB7 569 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 TLR8Q9NR97 1041 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 GLI2P10070 1586 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SNPHO15079 494 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 LTFP02788 710 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 CTNNB1P35222 781 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 GCLCP48506 637 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 CCZ1BP86790 482 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 CCZ1P86791 482 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 SNX30Q5VWJ9 437 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 P3H2Q8IVL5 708 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 EPS8L3Q8TE67 593 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 MANSC1Q9H8J5 431 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 TRIM45Q9H8W5 580 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 HEY2Q9UBP5 337 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 DSEQ9UL01 958 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 RNF112Q9ULX5 631 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 TBX20Q9UMR3 447 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 SNX13Q9Y5W8 968 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 TBC1D3BA6NDS4 549 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 MED24O75448 989 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 BOP1Q14137 746 aaKnown RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 LPCAT2Q7L5N7 544 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 REXO1L1PQ8IX06 675 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 ZNF34Q8IZ26 560 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 C2orf73Q8N5S3 287 aaPredicted RBP9.64□□□□□ -0.87
ATL3-201ENST00000398868 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 OSBPL3Q9H4L5 887 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 CDHR2Q9BYE9 1310 aa9.64□□□□□ -0.87
ATL3-201ENST00000398868 ERI2A8K979 691 aaKnown RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 KPNA3O00505 521 aaPredicted RBP9.63□□□□□ -0.87
ATL3-201ENST00000398868 ATP6V1G2O95670 118 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 COMTP21964 271 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 RFC5P40937 340 aa9.63□□□□□ -0.87
ATL3-201ENST00000398868 POU4F1Q01851 419 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms