RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TCF4P15884 667 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 MARCKSL1P49006 195 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 UBE3AQ05086 875 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 RAB6CQ53S08 254 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 SAMD11Q96NU1 681 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 RAB6CQ9H0N0 254 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 NAALADL1Q9UQQ1 740 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 YIPF1Q9Y548 306 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 USP3Q9Y6I4 520 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 MYO16Q9Y6X6 1858 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 CAPN9O14815 690 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 TFE3P19532 575 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-204ENST00000397443 SDC4P31431 198 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 PGFP49763 221 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 ZNF143P52747 638 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-204ENST00000397443 PIGHQ14442 188 aaPredicted RBP22.19■■□□□ 1.14
CPNE1-204ENST00000397443 CCDC14Q49A88 953 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 BHLHA9Q7RTU4 235 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 GPR65Q8IYL9 337 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 GDPD5Q8WTR4 605 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 KRT35Q92764 455 aa22.19■■□□□ 1.14
CPNE1-204ENST00000397443 SYNJ2BP-COX16A0A087WUM0 186 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 H3BNC9 293 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 LTFP02788 710 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 BMP8BP34820 402 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 ALDH1A3P47895 512 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SYPL2Q5VXT5 272 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 PM20D1Q6GTS8 502 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 CC2D1AQ6P1N0 951 aaPredicted RBP22.18■■□□□ 1.14
CPNE1-204ENST00000397443 GOLGA1Q92805 767 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 POPDC2Q9HBU9 364 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 NGRNQ9NPE2 291 aaKnown RBP22.18■■□□□ 1.14
CPNE1-204ENST00000397443 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.18■■□□□ 1.14
CPNE1-204ENST00000397443 COX16Q9P0S2 106 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SLC38A8A6NNN8 435 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 KCNK3O14649 394 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SART1O43290 800 aaKnown RBP22.18■■□□□ 1.14
CPNE1-204ENST00000397443 NCAM1P13591 858 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SCNN1AP37088 669 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 TAS2R40P59535 323 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 TWF1Q12792 350 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 FNIP1Q8TF40 1166 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 FBXO32Q969P5 355 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 HES6Q96HZ4 224 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SPATA17Q96L03 361 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 CNPY3Q9BT09 278 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 IRAK3Q9Y616 596 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 SAR1BQ9Y6B6 198 aa22.18■■□□□ 1.14
CPNE1-204ENST00000397443 ZNF185O15231 689 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 DAB1O75553 588 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 YWHAQP27348 245 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 SLC1A1P43005 524 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 PITX1P78337 314 aaPredicted RBP22.17■■□□□ 1.14
CPNE1-204ENST00000397443 BSPRYQ5W0U4 402 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 PAPD7Q5XG87 772 aaKnown RBP22.17■■□□□ 1.14
CPNE1-204ENST00000397443 RBM23Q86U06 439 aaKnown RBP22.17■■□□□ 1.14
CPNE1-204ENST00000397443 ARFGAP1Q8N6T3 406 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 SLC7A14Q8TBB6 771 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 ADAM32Q8TC27 787 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 CAPZA3Q96KX2 299 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 FBXO44Q9H4M3 255 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 ASNSD1Q9NWL6 643 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 GMIPQ9P107 970 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 PCSK1NQ9UHG2 260 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 SNX12Q9UMY4 172 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 INSL5Q9Y5Q6 135 aa22.17■■□□□ 1.14
CPNE1-204ENST00000397443 ZNF638Q14966 1978 aaKnown RBP22.17■■□□□ 1.14
CPNE1-204ENST00000397443 TRANK1O15050 2925 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 A0A1W2PQH9 124 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 EPOPA6NHQ4 379 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 RFXAPO00287 272 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 PER2O15055 1255 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 LRCH4O75427 683 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 FYNP06241 537 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 MATKP42679 507 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 SULT1E1P49888 294 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 YWHAGP61981 247 aaKnown RBP eCLIP22.16■■□□□ 1.14
CPNE1-204ENST00000397443 TAF12Q16514 161 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 FAM172AQ8WUF8 416 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 OSBPL9Q96SU4 736 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 ADAM33Q9BZ11 813 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 NMUR1Q9HB89 426 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 NUDT5Q9UKK9 219 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 PLXNA3P51805 1871 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 FSCN2O14926 492 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 DDX3YO15523 660 aaKnown RBP22.16■■□□□ 1.14
CPNE1-204ENST00000397443 RNF8O76064 485 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 RTN3O95197 1032 aaPredicted RBP22.16■■□□□ 1.14
CPNE1-204ENST00000397443 GLUD1P00367 558 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 MAN1A1P33908 653 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 ATXN1P54253 815 aaKnown RBP22.16■■□□□ 1.14
CPNE1-204ENST00000397443 AMPD2Q01433 879 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 TAF10Q12962 218 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 ZFYVE27Q5T4F4 411 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 SCYL2Q6P3W7 929 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 SCD5Q86SK9 330 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 TCEAL8Q8IYN2 117 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 NIPA2Q8N8Q9 360 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 COG1Q8WTW3 980 aa22.16■■□□□ 1.14
CPNE1-204ENST00000397443 IRGQQ8WZA9 623 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms