RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ITPKAP23677 461 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 CACNA2D1P54289 1103 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 MESP2Q0VG99 397 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 C10orf76Q5T2E6 689 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 SNX30Q5VWJ9 437 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 PEAR1Q5VY43 1037 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 TERB1Q8NA31 727 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GLIS3Q8NEA6 775 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 ZCCHC14Q8WYQ9 949 aaKnown RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GATA6Q92908 595 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 HPS3Q969F9 1004 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 SMARCD1Q96GM5 515 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 USP28Q96RU2 1077 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GTPBP2Q9BX10 602 aaKnown RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 SPHK2Q9NRA0 654 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 KBTBD4Q9NVX7 518 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 CGNQ9P2M7 1197 aaKnown RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 CHORDC1Q9UHD1 332 aaPredicted RBP16.96■□□□□ 0.31
VCX3A-201ENST00000381089 IGF2RP11717 2491 aa16.96■□□□□ 0.31
VCX3A-201ENST00000381089 GON4LQ3T8J9 2241 aa16.96■□□□□ 0.3
VCX3A-201ENST00000381089 CLIC2O15247 247 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 OPHN1O60890 802 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF217O75362 1048 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 TULP3O75386 442 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 SERPINF2P08697 491 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 CHRM1P11229 460 aaPredicted RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 TRIM21P19474 475 aaKnown RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 NTSR1P30989 418 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 SLC5A3P53794 718 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 MYL6P60660 151 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 SIM1P81133 766 aaPredicted RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 BIRC3Q13489 604 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 GRAMD4Q6IC98 578 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 EPM2AIP1Q7L775 607 aaPredicted RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 FAM35AQ86V20 835 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 ETFBKMTQ8IXQ9 262 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 PHTF2Q8N3S3 785 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 FRMD1Q8N878 549 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 IQUBQ8NA54 791 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 XPO6Q96QU8 1125 aaKnown RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 TMEM121BQ9BXQ6 578 aaPredicted RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 ZDHHC4Q9NPG8 344 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 TMEM30AQ9NV96 361 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 NME7Q9Y5B8 376 aa16.95■□□□□ 0.3
VCX3A-201ENST00000381089 TNRC6BQ9UPQ9 1833 aaKnown RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 MYO18AQ92614 2054 aaKnown RBP16.95■□□□□ 0.3
VCX3A-201ENST00000381089 ASPMQ8IZT6 3477 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 TGFB1I1O43294 461 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 HYAL3O43820 417 aaPredicted RBP16.94■□□□□ 0.3
VCX3A-201ENST00000381089 TOP3BO95985 862 aaKnown RBP16.94■□□□□ 0.3
VCX3A-201ENST00000381089 SYPP08247 313 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 IRF1P10914 325 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 P4HA1P13674 534 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 HOXD13P35453 343 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 AP3M2P53677 418 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF33AQ06730 810 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 SEMA3BQ13214 749 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF699Q32M78 642 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 ZNF667Q5HYK9 610 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 BBS7Q8IWZ6 715 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 NELFCDQ8IXH7 590 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 SCFD1Q8WVM8 642 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 ZFRQ96KR1 1074 aaKnown RBP16.94■□□□□ 0.3
VCX3A-201ENST00000381089 KCNK16Q96T55 309 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 FBXO44Q9H4M3 255 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 CCSER2Q9H7U1 834 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 MAGEF1Q9HAY2 307 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 CALCOCO1Q9P1Z2 691 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
VCX3A-201ENST00000381089 MSRB2Q9Y3D2 182 aa16.94■□□□□ 0.3
VCX3A-201ENST00000381089 PCNX2A6NKB5 2137 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 EXOC3O60645 756 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 AP1G2O75843 785 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 GABRG2P18507 467 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 NASPP49321 788 aaPredicted RBP16.93■□□□□ 0.3
VCX3A-201ENST00000381089 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 PIP4P1Q86T03 277 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 CHPFQ8IZ52 775 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 SCAMP5Q8TAC9 235 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 GOLGA5Q8TBA6 731 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 DHX58Q96C10 678 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 XYLT2Q9H1B5 865 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 VRTNQ9H8Y1 702 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.93■□□□□ 0.3
VCX3A-201ENST00000381089 TLR8Q9NR97 1041 aaKnown RBP16.93■□□□□ 0.3
VCX3A-201ENST00000381089 KRT82Q9NSB4 513 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 DNAJC17Q9NVM6 304 aaKnown RBP16.93■□□□□ 0.3
VCX3A-201ENST00000381089 IL37Q9NZH6 218 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 GMIPQ9P107 970 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 WDR35Q9P2L0 1181 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 STARD13Q9Y3M8 1113 aa16.93■□□□□ 0.3
VCX3A-201ENST00000381089 SPAARA0A1B0GVQ0 90 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 SRRM3A6NNA2 597 aaPredicted RBP16.92■□□□□ 0.3
VCX3A-201ENST00000381089 SPTLC2O15270 562 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 ZZEF1O43149 2961 aa16.92■□□□□ 0.3
VCX3A-201ENST00000381089 TLR5O60602 858 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms