RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 CEACAM1P13688 526 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 AFMP43652 599 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 CASP4P49662 377 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 CDH8P55286 799 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 CUL4BQ13620 913 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 FUKQ8N0W3 1084 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 CRYBG2Q8N1P7 616 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 PHTF2Q8N3S3 785 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 SCAMP5Q8TAC9 235 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 TMC2Q8TDI7 906 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 NUSAP1Q9BXS6 441 aaKnown RBP24.57■■□□□ 1.52
C9orf47-202ENST00000375850 BACH2Q9BYV9 841 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 CSNK1G1Q9HCP0 422 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 EXOC1Q9NV70 894 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 PCDHA7Q9UN72 937 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 MYO16Q9Y6X6 1858 aa24.57■■□□□ 1.52
C9orf47-202ENST00000375850 SCAMP3O14828 347 aaKnown RBP24.56■■□□□ 1.52
C9orf47-202ENST00000375850 IKBKBO14920 756 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 MYL1P05976 194 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 ZSCAN22P10073 491 aaPredicted RBP24.56■■□□□ 1.52
C9orf47-202ENST00000375850 CASP1P29466 404 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 KDSRQ06136 332 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 GOLGA8FQ08AF8 430 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 GOLGA8DPQ0D2H9 430 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 SYT12Q8IV01 421 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 PLEKHO2Q8TD55 490 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 PIGKQ92643 395 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 CCSER2Q9H7U1 834 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 TLR8Q9NR97 1041 aaKnown RBP24.56■■□□□ 1.52
C9orf47-202ENST00000375850 GMIPQ9P107 970 aa24.56■■□□□ 1.52
C9orf47-202ENST00000375850 PDXKO00764 312 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 ZBTB24O43167 697 aaPredicted RBP24.55■■□□□ 1.52
C9orf47-202ENST00000375850 TULP3O75386 442 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 F13A1P00488 732 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 HNRNPLP14866 589 aaKnown RBP eCLIP24.55■■□□□ 1.52
C9orf47-202ENST00000375850 MESP2Q0VG99 397 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 ZACNQ401N2 412 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 SCARA5Q6ZMJ2 495 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 HTR3DQ70Z44 454 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 ACOT1Q86TX2 421 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 ZNF513Q8N8E2 541 aaPredicted RBP24.55■■□□□ 1.52
C9orf47-202ENST00000375850 TERB1Q8NA31 727 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 DNAI2Q9GZS0 605 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 USP25Q9UHP3 1055 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 STARD13Q9Y3M8 1113 aa24.55■■□□□ 1.52
C9orf47-202ENST00000375850 MAP1BP46821 2468 aaKnown RBP24.55■■□□□ 1.52
C9orf47-202ENST00000375850 TCRBV21S2A2A0A5A6 115 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 CDX4O14627 284 aaPredicted RBP24.54■■□□□ 1.52
C9orf47-202ENST00000375850 TLR5O60602 858 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 ADAM23O75077 832 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 KIF20AO95235 890 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 ANO4Q32M45 955 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 MAP7D1Q3KQU3 841 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 EMC10Q5UCC4 262 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 SLC36A4Q6YBV0 504 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 RABEPKQ7Z6M1 372 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 BBS7Q8IWZ6 715 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 PGBD3Q8N328 593 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 HMGB4Q8WW32 186 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 XPO6Q96QU8 1125 aaKnown RBP24.54■■□□□ 1.52
C9orf47-202ENST00000375850 SDCBP2Q9H190 292 aa24.54■■□□□ 1.52
C9orf47-202ENST00000375850 LSM7Q9UK45 103 aaKnown RBP24.54■■□□□ 1.52
C9orf47-202ENST00000375850 CIZ1Q9ULV3 898 aaPredicted RBP24.54■■□□□ 1.52
C9orf47-202ENST00000375850 AP5Z1O43299 807 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 VNN1O95497 513 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 HSP90AA1P07900 732 aaKnown RBP24.53■■□□□ 1.52
C9orf47-202ENST00000375850 IRX4P78413 519 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 ZNF252P-AS1Q0IIN9 211 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 STK4Q13043 487 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 TRIM61Q5EBN2 209 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 SH3PXD2AQ5TCZ1 1133 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 LYSMD4Q5XG99 296 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 SFTPA1Q8IWL2 248 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 SLC2A14Q8TDB8 520 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 SMOQ99835 787 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 IMPG2Q9BZV3 1241 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 PNPLA8Q9NP80 782 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 CYLDQ9NQC7 956 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.53■■□□□ 1.52
C9orf47-202ENST00000375850 WDR35Q9P2L0 1181 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 FRMD4BQ9Y2L6 1034 aa24.53■■□□□ 1.52
C9orf47-202ENST00000375850 ANTXRLA6NF34 631 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 PATE3B3GLJ2 98 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 MAPK13O15264 365 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 KLRC4O43908 158 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 ASS1P00966 412 aaKnown RBP24.52■■□□□ 1.52
C9orf47-202ENST00000375850 FAM200BP0CF97 657 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 NTSR1P30989 418 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 ATP5C1P36542 298 aaKnown RBP24.52■■□□□ 1.52
C9orf47-202ENST00000375850 NDST1P52848 882 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 C10orf76Q5T2E6 689 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 PEAR1Q5VY43 1037 aaPredicted RBP24.52■■□□□ 1.52
C9orf47-202ENST00000375850 GRAMD4Q6IC98 578 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 SDE2Q6IQ49 451 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 KLHDC10Q6PID8 442 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 SLC23A3Q6PIS1 610 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 NAT16Q8N8M0 369 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 KIAA0895Q8NCT3 520 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 ZMIZ2Q8NF64 920 aa24.52■■□□□ 1.52
C9orf47-202ENST00000375850 CEP76Q8TAP6 659 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms