RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ALDH5A1P51649 535 aaPredicted RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 RHAGQ02094 409 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 FKBP4Q02790 459 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP48-203ENST00000374732 ELOAQ14241 798 aaKnown RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 DCAF8Q5TAQ9 597 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 VWA5B1Q5TIE3 1220 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 GPR155Q7Z3F1 870 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SGMS1Q86VZ5 419 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 ZNF248Q8NDW4 579 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SPPL3Q8TCT6 385 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 TANKQ92844 425 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 USP13Q92995 863 aaPredicted RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 IQCDQ96DY2 449 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CRELD1Q96HD1 420 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 RBM4BQ9BQ04 359 aaKnown RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 RBM4Q9BWF3 364 aaKnown RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 SP140LQ9H930 580 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SPON1Q9HCB6 807 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 PDE7BQ9NP56 450 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 HAUS2Q9NVX0 235 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 TNFSF13BQ9Y275 285 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 PCDHGB6Q9Y5F9 930 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 PHLPP2Q6ZVD8 1323 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 A0A1W2PPH5 198 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 LRRC14BA6NHZ5 514 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 H3BQF6 201 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 HGSO14964 777 aaPredicted RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 N4BP3O15049 544 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SLC22A3O75751 556 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CCNDBP1O95273 360 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 C6P13671 934 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 SLCO1A2P46721 670 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 ARHGDIAP52565 204 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 AMPD2Q01433 879 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 TAP2Q03519 686 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 GRIK4Q16099 956 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 PRPF40BQ6NWY9 871 aaKnown RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 PAPD4Q6PIY7 484 aaKnown RBP8.25□□□□□ -1.09
USP48-203ENST00000374732 TXNDC11Q6PKC3 985 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 NUDT13Q86X67 352 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CREG2Q8IUH2 290 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 RNF169Q8NCN4 708 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 OR10Z1Q8NGY1 313 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 CEP19Q96LK0 163 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 ZBED2Q9BTP6 218 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 OSGEPQ9NPF4 335 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 LRFN2Q9ULH4 789 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 AGAP1Q9UPQ3 857 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 AP3M1Q9Y2T2 418 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 MEGF6O75095 1541 aa8.25□□□□□ -1.09
USP48-203ENST00000374732 B4E171 279 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 E7ENQ6 273 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 FGF4P08620 206 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 TRA2BP62995 288 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 LGALS3BPQ08380 585 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CDC20Q12834 499 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 STARD3Q14849 445 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ZNF425Q6IV72 752 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 SH3RF1Q7Z6J0 888 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 NELFCDQ8IXH7 590 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 SNX31Q8N9S9 440 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 GPR156Q8NFN8 814 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CDCA5Q96FF9 252 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 EBF2Q9HAK2 575 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 SLC40A1Q9NP59 571 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 PTCH2Q9Y6C5 1203 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 WDR17Q8IZU2 1322 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 H7C0C1 242 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 AXIN1O15169 862 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ATMINO43313 823 aaPredicted RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 SMAD6O43541 496 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 GCATO75600 419 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 PDE5AO76074 875 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 EGFRP00533 1210 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 OPN1MWP04001 364 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 OPN1MW2P0DN77 364 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 OPN1MW3P0DN78 364 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ICAM2P13598 275 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ALDH4A1P30038 563 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 DRG2P55039 364 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 AANATQ16613 207 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 MIER3Q7Z3K6 550 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 DPP9Q86TI2 863 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 COMTD1Q86VU5 262 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ERO1BQ86YB8 467 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 NUP85Q9BW27 656 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 COPRSQ9NQ92 184 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 ASH2LQ9UBL3 628 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 CNOT6Q9ULM6 557 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 FAF1Q9UNN5 650 aaPredicted RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 RUVBL1Q9Y265 456 aaKnown RBP8.24□□□□□ -1.09
USP48-203ENST00000374732 FPGT-TNNI3KV9GXZ4 949 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 FLT1P17948 1338 aa8.24□□□□□ -1.09
USP48-203ENST00000374732 BTAF1O14981 1849 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms