RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CDH22Q9UJ99 828 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 NFU1Q9UMS0 254 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 PTPN1P18031 435 aaKnown RBP21.55■■□□□ 1.04
SYNC-201ENST00000373484 CD58P19256 250 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 TBXAS1P24557 533 aaPredicted RBP21.55■■□□□ 1.04
SYNC-201ENST00000373484 CDR1P51861 262 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 GUCY2DQ02846 1103 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 EXOC3L4Q17RC7 722 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 TTC39CQ8N584 583 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 ACTRT1Q8TDG2 376 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 ZBTB9Q96C00 473 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 TNIP3Q96KP6 325 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 CISHQ9NSE2 258 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 GEMIN8Q9NWZ8 242 aaKnown RBP21.55■■□□□ 1.04
SYNC-201ENST00000373484 SLC27A5Q9Y2P5 690 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 YIPF1Q9Y548 306 aa21.55■■□□□ 1.04
SYNC-201ENST00000373484 GREB1Q4ZG55 1949 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 CILPO75339 1184 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 LRG1P02750 347 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 NAP1L1P55209 391 aaKnown RBP21.54■■□□□ 1.04
SYNC-201ENST00000373484 SMAD2Q15796 467 aaKnown RBP21.54■■□□□ 1.04
SYNC-201ENST00000373484 PPM1KQ8N3J5 372 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 OTUD6BQ8N6M0 293 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 SMG7Q92540 1137 aaKnown RBP21.54■■□□□ 1.04
SYNC-201ENST00000373484 MYLPFQ96A32 169 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 FUBP3Q96I24 572 aaKnown RBP eCLIP21.54■■□□□ 1.04
SYNC-201ENST00000373484 FAM50BQ9Y247 325 aa21.54■■□□□ 1.04
SYNC-201ENST00000373484 GOLGA6L10A6NI86 522 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 CCL16O15467 120 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 MDH1P40925 334 aaKnown RBP21.53■■□□□ 1.04
SYNC-201ENST00000373484 MTHFRP42898 656 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 LIG3P49916 1009 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 PDCLQ13371 301 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 MDH1BQ5I0G3 518 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 C4orf50Q6ZRC1 276 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 SPATA2LQ8IUW3 424 aaPredicted RBP21.53■■□□□ 1.04
SYNC-201ENST00000373484 ARHGEF19Q8IW93 802 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 CRYBG2Q8N1P7 616 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 CASKIN2Q8WXE0 1202 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 PCED1BQ96HM7 432 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 RIPOR3Q96MK2 946 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 TWNKQ96RR1 684 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 LPIN3Q9BQK8 851 aa21.53■■□□□ 1.04
SYNC-201ENST00000373484 TACO1Q9BSH4 297 aaKnown RBP21.53■■□□□ 1.04
SYNC-201ENST00000373484 CCDC188H7C350 402 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 BUB1O43683 1085 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 XYLBO75191 536 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 HAPLN1P10915 354 aaPredicted RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 IL9P15248 144 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 SLC9A1P19634 815 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 PON1P27169 355 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 TUFMP49411 452 aaKnown RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 GCNT1Q02742 428 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 TWF1Q12792 350 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 MTMR3Q13615 1198 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 CBX2Q14781 532 aaPredicted RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 SPDYCQ5MJ68 293 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 ATAT1Q5SQI0 421 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 PHLDB3Q6NSJ2 640 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 ACOT1Q86TX2 421 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 UBR7Q8N806 425 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 NECTIN4Q96NY8 510 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 LSM14BQ9BX40 385 aaKnown RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 NT5C1AQ9BXI3 368 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 TMBIM4Q9HC24 238 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 INTUQ9ULD6 942 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 FAM107AO95990 144 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 FNTAP49354 379 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 YWHAEP62258 255 aaKnown RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 PLD1Q13393 1074 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 ORC1Q13415 861 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 ASIC2Q16515 512 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 MGAT5BQ3V5L5 792 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 MS4A14Q96JA4 679 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 SEPT5Q99719 369 aaPredicted RBP21.52■■□□□ 1.04
SYNC-201ENST00000373484 PIDD1Q9HB75 910 aa21.52■■□□□ 1.04
SYNC-201ENST00000373484 A0A0A6YYK5 440 aaPredicted RBP21.51■■□□□ 1.03
SYNC-201ENST00000373484 ANKRD65E5RJM6 399 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 SOAT2O75908 522 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 KRT14P02533 472 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 BMP1P13497 986 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 CYP2F1P24903 491 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 HNRNPH1P31943 449 aaKnown RBP21.51■■□□□ 1.03
SYNC-201ENST00000373484 KLHL30Q0D2K2 578 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 RPS6KA1Q15418 735 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 NAA35Q5VZE5 725 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 TAX1BP1Q86VP1 789 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 KAT5Q92993 513 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 PSMB7Q99436 277 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 KRT12Q99456 494 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 ELOVL4Q9GZR5 314 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 GANQ9H2C0 597 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 SMARCAL1Q9NZC9 954 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 EHD2Q9NZN4 543 aa21.51■■□□□ 1.03
SYNC-201ENST00000373484 GFPT2O94808 682 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 FAM153BP0C7A2 387 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 MAGEA11P43364 429 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 ALDH1A3P47895 512 aa21.5■■□□□ 1.03
SYNC-201ENST00000373484 POLR2FP61218 127 aaKnown RBP21.5■■□□□ 1.03
SYNC-201ENST00000373484 FAM153CQ494X1 144 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms