RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 TM9SF3Q9HD45 589 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 ABI2Q9NYB9 513 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 DSEQ9UL01 958 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 VPS9D1Q9Y2B5 631 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 PCDHB1Q9Y5F3 818 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 ZFHX3Q15911 3703 aa11.13□□□□□ -0.63
TUBE1-201ENST00000368657 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
TUBE1-201ENST00000368657 TLN1Q9Y490 2541 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 C2orf78A6NCI8 922 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 KCNJ18B7U540 433 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 SLC37A4O43826 429 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 USP12O75317 370 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 TULP3O75386 442 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 GJB6O95452 261 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 CYP11A1P05108 521 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 MCF2P10911 925 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ACP1P24666 158 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 RBMS1P29558 406 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ZXDBP98169 803 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ZNF568Q3ZCX4 644 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 EGFLAMQ63HQ2 1017 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ADAT2Q7Z6V5 191 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 LRRTM3Q86VH5 581 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ETFBKMTQ8IXQ9 262 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 SAP25Q8TEE9 199 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 SKA1Q96BD8 255 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 OTUB2Q96DC9 234 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ACOX2Q99424 681 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ELF4Q99607 663 aaPredicted RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 ACO2Q99798 780 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 EIF2AK1Q9BQI3 630 aaKnown RBP11.12□□□□□ -0.63
TUBE1-201ENST00000368657 TCHPQ9BT92 498 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 SH3GLB2Q9NR46 395 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 TUBGCP4Q9UGJ1 667 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
TUBE1-201ENST00000368657 XPOTO43592 962 aaKnown RBP11.11□□□□□ -0.63
TUBE1-201ENST00000368657 BAG4O95429 457 aaKnown RBP11.11□□□□□ -0.63
TUBE1-201ENST00000368657 FAM87AP0C7U9 286 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 ACADMP11310 421 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 ADD1P35611 737 aaKnown RBP11.11□□□□□ -0.63
TUBE1-201ENST00000368657 C21orf59P57076 290 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 LILRA4P59901 499 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 STARD3Q14849 445 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 SLC10A6Q3KNW5 377 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 ZSCAN23Q3MJ62 389 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 LY6G5CQ5SRR4 150 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 KANSL1Q7Z3B3 1105 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 METTL23Q86XA0 190 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 NAT16Q8N8M0 369 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 PIGOQ8TEQ8 1089 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 BSNDQ8WZ55 320 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 SNX19Q92543 992 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 HAS1Q92839 578 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 SGF29Q96ES7 293 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 IFT74Q96LB3 600 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 DEPDC7Q96QD5 511 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 EPN3Q9H201 632 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 TMPRSS4Q9NRS4 437 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 GEMIN8Q9NWZ8 242 aaKnown RBP11.11□□□□□ -0.63
TUBE1-201ENST00000368657 UBQLN1Q9UMX0 589 aaKnown RBP11.11□□□□□ -0.63
TUBE1-201ENST00000368657 RAD54BQ9Y620 910 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 CENPEQ02224 2701 aa11.11□□□□□ -0.63
TUBE1-201ENST00000368657 CITO14578 2027 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 VILLO15195 856 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 EFSO43281 561 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 GCFC2P16383 781 aaKnown RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 CD27P26842 260 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 CASRP41180 1078 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 CDR1P51861 262 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SLC7A9P82251 487 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 ZBTB6Q15916 424 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 NFE2Q16621 373 aaPredicted RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 KCNT1Q5JUK3 1230 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 DDX42Q86XP3 938 aaKnown RBP eCLIP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SLFN12Q8IYM2 578 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SCFD1Q8WVM8 642 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 PRCCQ92733 491 aaPredicted RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 ERLEC1Q96DZ1 483 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SIPA1Q96FS4 1042 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SLC46A1Q96NT5 459 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 ACE2Q9BYF1 805 aaPredicted RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 RBM8AQ9Y5S9 174 aaKnown RBP11.1□□□□□ -0.63
TUBE1-201ENST00000368657 CELSR2Q9HCU4 2923 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
TUBE1-201ENST00000368657 SGSM2O43147 1006 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 HOXC11O43248 304 aaPredicted RBP11.09□□□□□ -0.63
TUBE1-201ENST00000368657 TRAK2O60296 914 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 GPR15P49685 360 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 DDR2Q16832 855 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 FUT11Q495W5 492 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 CDCP2Q5VXM1 449 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 GRAMD4Q6IC98 578 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 TMPRSS6Q8IU80 811 aa11.09□□□□□ -0.63
TUBE1-201ENST00000368657 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms