RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 PATE3B3GLJ2 98 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 TNFRSF10BO14763 440 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 TLR5O60602 858 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 IRF1P10914 325 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 CHRM1P11229 460 aaPredicted RBP14.15□□□□□ -0.14
FAM3B-201ENST00000357985 CSRP1P21291 193 aaKnown RBP14.15□□□□□ -0.14
FAM3B-201ENST00000357985 AFMP43652 599 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 ME1P48163 572 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 CDH8P55286 799 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 GOLGA8FQ08AF8 430 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 GOLGA8DPQ0D2H9 430 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 MESP2Q0VG99 397 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 CUL4BQ13620 913 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 TRIM61Q5EBN2 209 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 SPDYCQ5MJ68 293 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 SH3PXD2AQ5TCZ1 1133 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 RESP18Q5W5W9 173 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 LYSMD4Q5XG99 296 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 SFTPA1Q8IWL2 248 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 BBS7Q8IWZ6 715 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 PHTF2Q8N3S3 785 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 ZNF513Q8N8E2 541 aaPredicted RBP14.15□□□□□ -0.14
FAM3B-201ENST00000357985 SCAMP5Q8TAC9 235 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 PLEKHO2Q8TD55 490 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 KCNV2Q8TDN2 545 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 PARD3BQ8TEW8 1205 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 RLN3Q8WXF3 142 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 KCNK16Q96T55 309 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 FBXO44Q9H4M3 255 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 SPHK2Q9NRA0 654 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 IL37Q9NZH6 218 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 DEC1Q9P2X7 70 aa14.15□□□□□ -0.14
FAM3B-201ENST00000357985 LSM7Q9UK45 103 aaKnown RBP14.15□□□□□ -0.14
FAM3B-201ENST00000357985 PCDH15Q96QU1 1955 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ASCC3Q8N3C0 2202 aaKnown RBP14.14□□□□□ -0.15
FAM3B-201ENST00000357985 A0A0A0MRY4 1105 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 TBC1D3BA6NDS4 549 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 TULP3O75386 442 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 F13A1P00488 732 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ZDHHC11BP0C7U3 371 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 CEACAM1P13688 526 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 CCDC130P13994 396 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 HOXB2P14652 356 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 HOXD12P35452 270 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 PIK3CAP42336 1068 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 CLDN10P78369 228 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 FOXC1Q12948 553 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ANO4Q32M45 955 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 C10orf76Q5T2E6 689 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ATL3Q6DD88 541 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 GRAMD4Q6IC98 578 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 PAQR9Q6ZVX9 377 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ARMCX6Q7L4S7 300 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ACOT1Q86TX2 421 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 SYT12Q8IV01 421 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 FUKQ8N0W3 1084 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
FAM3B-201ENST00000357985 SDCBP2Q9H190 292 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 ZDHHC4Q9NPG8 344 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 TLR8Q9NR97 1041 aaKnown RBP14.14□□□□□ -0.15
FAM3B-201ENST00000357985 CHORDC1Q9UHD1 332 aaPredicted RBP14.14□□□□□ -0.15
FAM3B-201ENST00000357985 CHD8Q9HCK8 2581 aa14.14□□□□□ -0.15
FAM3B-201ENST00000357985 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 CDX4O14627 284 aaPredicted RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 GIPC1O14908 333 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 ZBTB24O43167 697 aaPredicted RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 AP5Z1O43299 807 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 ADAM23O75077 832 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 VNN1O95497 513 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 C4BPAP04003 597 aaKnown RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 HSP90AA1P07900 732 aaKnown RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 FAM200BP0CF97 657 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 ZSCAN22P10073 491 aaPredicted RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 IRX4P78413 519 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 SGSM1Q2NKQ1 1148 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 MAP7D1Q3KQU3 841 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 UAP1L1Q3KQV9 507 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 FOXD4L6Q3SYB3 417 aaPredicted RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 ZACNQ401N2 412 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 EMC10Q5UCC4 262 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 UNQ6494/PRO21346Q6UXR6 183 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 FOXD4L3Q6VB84 417 aaPredicted RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 SLC36A4Q6YBV0 504 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 UNC93AQ86WB7 457 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 HSCBQ8IWL3 235 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 TMEFF1Q8IYR6 380 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 NAT16Q8N8M0 369 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 KIAA0895Q8NCT3 520 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 SLC2A14Q8TDB8 520 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 TAF4BQ92750 862 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 XPO6Q96QU8 1125 aaKnown RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 IMPG2Q9BZV3 1241 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 CSNK1G1Q9HCP0 422 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 PCDHA7Q9UN72 937 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 USP24Q9UPU5 2620 aa14.13□□□□□ -0.15
FAM3B-201ENST00000357985 ATXN2Q99700 1313 aaKnown RBP14.13□□□□□ -0.15
FAM3B-201ENST00000357985 CACNG3O60359 315 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms