RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ABLIM3O94929 683 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 CTNNB1P35222 781 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 YWHAZP63104 245 aaKnown RBP19■□□□□ 0.63
SMARCD3-202ENST00000356800 ZNF211Q13398 564 aaPredicted RBP19■□□□□ 0.63
SMARCD3-202ENST00000356800 TXNRD3NBQ6F5E7 133 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 AADACL2Q6P093 401 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 DEFB106AQ8N104 65 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 TSC1Q92574 1164 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 SLC2A13Q96QE2 648 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 DDX23Q9BUQ8 820 aaKnown RBP19■□□□□ 0.63
SMARCD3-202ENST00000356800 MRPL17Q9NRX2 175 aaKnown RBP19■□□□□ 0.63
SMARCD3-202ENST00000356800 CHD9Q3L8U1 2897 aa19■□□□□ 0.63
SMARCD3-202ENST00000356800 CHD7Q9P2D1 2997 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 PSTPIP1O43586 416 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 CEP104O60308 925 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 SEC24AO95486 1093 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 GLI1P08151 1106 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 CTSAP10619 480 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 IL1R2P27930 398 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 SDC4P31431 198 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 MATKP42679 507 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 SSR1P43307 286 aaKnown RBP18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 PTPN9P43378 593 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 ATP11AP98196 1134 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 SLC25A11Q02978 314 aaKnown RBP18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 ACAP1Q15027 740 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 CLUL1Q15846 466 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 MGAT5BQ3V5L5 792 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 TEX35Q5T0J7 233 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 RHOT1Q8IXI2 618 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 GPR65Q8IYL9 337 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 GPR152Q8TDT2 470 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 IRGQQ8WZA9 623 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 SEPT5Q99719 369 aaPredicted RBP18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 C17orf80Q9BSJ5 609 aa18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 AFF4Q9UHB7 1163 aaKnown RBP18.99■□□□□ 0.63
SMARCD3-202ENST00000356800 PGRMC1O00264 195 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 SART1O43290 800 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 PYGMP11217 842 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 RWDD2BP57060 319 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 USP46P62068 366 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 RAB33AQ14088 237 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 ELF2Q15723 593 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 CDO1Q16878 200 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 ATP13A4Q4VNC1 1196 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 LRRC38Q5VT99 294 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 OTUD1Q5VV17 481 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 SYPL2Q5VXT5 272 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 NUP93Q8N1F7 819 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 NOA1Q8NC60 698 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 ZNF461Q8TAF7 563 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 CENPIQ92674 756 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 POPDC2Q9HBU9 364 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 RXFP1Q9HBX9 757 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 ALG13Q9NP73 1137 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 CALCOCO1Q9P1Z2 691 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 FNIP2Q9P278 1114 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 STK39Q9UEW8 545 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 TEX28O15482 410 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 LTFP02788 710 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 MIPP30301 263 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 GJC1P36383 396 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 PGFP49763 221 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 PITX1P78337 314 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 IFRD2Q12894 506 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 TPGS2Q68CL5 300 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 CYP4V2Q6ZWL3 525 aaPredicted RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 MMGT1Q8N4V1 131 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 GPR161Q8N6U8 529 aaKnown RBP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 FAM172AQ8WUF8 416 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 NT5C3BQ969T7 300 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 PEBP4Q96S96 227 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 IL37Q9NZH6 218 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 NAALADL1Q9UQQ1 740 aa18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
SMARCD3-202ENST00000356800 RNF8O76064 485 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 ATF6P18850 670 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 DNAJB1P25685 340 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 NOS2P35228 1153 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 PCK1P35558 622 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 HDAC4P56524 1084 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 DCAF6Q58WW2 860 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 KATNAL2Q8IYT4 538 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 TNS4Q8IZW8 715 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 SPATA17Q96L03 361 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 TBCBQ99426 244 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 NAP1L3Q99457 506 aaPredicted RBP18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 NPY6RQ99463 290 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 PLVAPQ9BX97 442 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 NGRNQ9NPE2 291 aaKnown RBP18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 PCSK1NQ9UHG2 260 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 LZTS1Q9Y250 596 aa18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 RANBP2P49792 3224 aaKnown RBP18.97■□□□□ 0.63
SMARCD3-202ENST00000356800 C5orf67F2Z3F1 127 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 CA3P07451 260 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 CNPP09543 421 aaKnown RBP18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 ATF2P15336 505 aa18.96■□□□□ 0.63
SMARCD3-202ENST00000356800 ERVFC1P60507 584 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms