RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 C18orf8Q96DM3 657 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 VCPIP1Q96JH7 1222 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
FDPS-201ENST00000356657 ULBP1Q9BZM6 244 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 TASP1Q9H6P5 420 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 SEPT11Q9NVA2 429 aaKnown RBP16.8■□□□□ 0.28
FDPS-201ENST00000356657 TMEM51Q9NW97 253 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 ASNSD1Q9NWL6 643 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 WDR35Q9P2L0 1181 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 EPS15L1Q9UBC2 864 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 A0A0C4DFX4 3053 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 E5RJQ4 531 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 TADA3O75528 432 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 RALAP11233 206 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 MMP8P22894 467 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 CCR2P41597 374 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 RGS7P49802 495 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 NTHL1P78549 312 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
FDPS-201ENST00000356657 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 MTSS1LQ765P7 747 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 ZNF571Q7Z3V5 609 aaPredicted RBP16.8■□□□□ 0.28
FDPS-201ENST00000356657 TC2NQ8N9U0 490 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 NXPE3Q969Y0 559 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 TRIM11Q96F44 468 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 CPXM1Q96SM3 734 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 SLITRK6Q9H5Y7 841 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 OLA1Q9NTK5 396 aaKnown RBP16.8■□□□□ 0.28
FDPS-201ENST00000356657 CYTH4Q9UIA0 394 aa16.8■□□□□ 0.28
FDPS-201ENST00000356657 HELZP42694 1942 aaKnown RBP16.79■□□□□ 0.28
FDPS-201ENST00000356657 MOSPD3O75425 235 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 OLFM2O95897 454 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 OAS1P00973 400 aaKnown RBP16.79■□□□□ 0.28
FDPS-201ENST00000356657 USP17L7P0C7H9 530 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 LCP1P13796 627 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 CEBPBP17676 345 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 GBP2P32456 591 aaPredicted RBP16.79■□□□□ 0.28
FDPS-201ENST00000356657 ADKP55263 362 aaKnown RBP16.79■□□□□ 0.28
FDPS-201ENST00000356657 PTPN20Q4JDL3 420 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 EFHC1Q5JVL4 640 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 HECTD3Q5T447 861 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 WDR59Q6PJI9 974 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 ADHFE1Q8IWW8 467 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 ZDHHC14Q8IZN3 488 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 KIAA1958Q8N8K9 716 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 ITFG1Q8TB96 612 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 TCEAL4Q96EI5 215 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 TRPV4Q9HBA0 871 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 ABCC13Q9NSE7 274 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 GMIPQ9P107 970 aa16.79■□□□□ 0.28
FDPS-201ENST00000356657 C5orf42Q9H799 3197 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 TRAV19A0A0A6YYK7 116 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 HSF2BPO75031 334 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 LAMP2P13473 410 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 SSTR3P32745 418 aaPredicted RBP16.78■□□□□ 0.28
FDPS-201ENST00000356657 AVPR1AP37288 418 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 YWHAGP61981 247 aaKnown RBP eCLIP16.78■□□□□ 0.28
FDPS-201ENST00000356657 ZNF268Q14587 947 aaPredicted RBP16.78■□□□□ 0.28
FDPS-201ENST00000356657 TEAD2Q15562 447 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 GPR158Q5T848 1215 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 SLC26A9Q7LBE3 791 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 ARCQ7LC44 396 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 SLC30A5Q8TAD4 765 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 OBP2AQ9NY56 170 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 ARHGAP20Q9P2F6 1191 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 CDH22Q9UJ99 828 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 NAGPAQ9UK23 515 aa16.78■□□□□ 0.28
FDPS-201ENST00000356657 PAPSS1O43252 624 aaPredicted RBP16.77■□□□□ 0.28
FDPS-201ENST00000356657 TLR5O60602 858 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 RTN2O75298 545 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 LTFP02788 710 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 SKILP12757 684 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 FECHP22830 423 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 SLC18A3Q16572 532 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 DDX42Q86XP3 938 aaKnown RBP eCLIP16.77■□□□□ 0.286e-7■■□□□ 13
FDPS-201ENST00000356657 SCUBE3Q8IX30 993 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 CMTM8Q8IZV2 173 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 CPA5Q8WXQ8 436 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 SMARCD2Q92925 531 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 CCDC42Q96M95 316 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 PCDHB18PQ96TA0 734 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.77■□□□□ 0.28
FDPS-201ENST00000356657 RRN3Q9NYV6 651 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 ADAM22Q9P0K1 906 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 ADAMTS1Q9UHI8 967 aa16.77■□□□□ 0.28
FDPS-201ENST00000356657 TNFRSF10AO00220 468 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 DDX3XO00571 662 aaKnown RBP eCLIP16.76■□□□□ 0.279e-23■□□□□ 11.1
FDPS-201ENST00000356657 GABBR2O75899 941 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 CKMP06732 381 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 MYBL1P10243 752 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 TCF3P15923 654 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 ATP5C1P36542 298 aaKnown RBP16.76■□□□□ 0.27
FDPS-201ENST00000356657 YWHAZP63104 245 aaKnown RBP16.76■□□□□ 0.27
FDPS-201ENST00000356657 SLC7A9P82251 487 aa16.76■□□□□ 0.27
FDPS-201ENST00000356657 CYP4F8P98187 520 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms