RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 MIIPQ5JXC2 388 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 TRIM65Q6PJ69 517 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 TMEM270Q6UE05 265 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 ANKRD52Q8NB46 1076 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 ENOX1Q8TC92 643 aaKnown RBP16.25■□□□□ 0.19
VAPA-201ENST00000340541 TFAP2BQ92481 460 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 GTSE1Q9NYZ3 720 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 SMG5Q9UPR3 1016 aaKnown RBP16.25■□□□□ 0.19
VAPA-201ENST00000340541 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
VAPA-201ENST00000340541 GTPBP10A4D1E9 387 aaKnown RBP16.24■□□□□ 0.19
VAPA-201ENST00000340541 PAPSS2O95340 614 aaPredicted RBP16.24■□□□□ 0.19
VAPA-201ENST00000340541 PAEPP09466 180 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 VDRP11473 427 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 CXCL12P48061 93 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 PDE6CP51160 858 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 KIF11P52732 1056 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 PLCB2Q00722 1185 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 APBA1Q02410 837 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 TNK2Q07912 1038 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 LRRC32Q14392 662 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 GOLGA7BQ2TAP0 167 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 SGO2Q562F6 1265 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 DGKKQ5KSL6 1271 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 GJB7Q6PEY0 223 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 RALGPS2Q86X27 583 aaPredicted RBP16.24■□□□□ 0.19
VAPA-201ENST00000340541 FAM114A1Q8IWE2 563 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 SPEM1Q8N4L4 309 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 SH3RF2Q8TEC5 729 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 UBXN6Q9BZV1 441 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 FBXO44Q9H4M3 255 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 GKN1Q9NS71 199 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 THG1LQ9NWX6 298 aaKnown RBP16.24■□□□□ 0.19
VAPA-201ENST00000340541 TSPAN16Q9UKR8 245 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 SCML2Q9UQR0 700 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 NFE2L3Q9Y4A8 694 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 PCDHB4Q9Y5E5 795 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 USP3Q9Y6I4 520 aa16.24■□□□□ 0.19
VAPA-201ENST00000340541 OTOL1A6NHN0 477 aaPredicted RBP16.23■□□□□ 0.19
VAPA-201ENST00000340541 KCNJ18B7U540 433 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 TULP2O00295 520 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CYP26A1O43174 497 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 COCHO43405 550 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 ABL1P00519 1130 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CALCAP01258 141 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CD19P15391 556 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 PON1P27169 355 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CNR2P34972 360 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 SOX9P48436 509 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 TUBP50607 506 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
VAPA-201ENST00000340541 KCNJ12Q14500 433 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 MTF1Q14872 753 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 STX1AQ16623 288 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 VWA3BQ502W6 1294 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CDKAL1Q5VV42 579 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 TRIM68Q6AZZ1 485 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 DPY19L2P1Q6NXN4 242 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 TSSK4Q6SA08 328 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 SASS6Q6UVJ0 657 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 GBP6Q6ZN66 633 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 PIGZQ86VD9 579 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 SYNPOQ8N3V7 929 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 RBBP8NLQ8NC74 664 aaPredicted RBP16.23■□□□□ 0.19
VAPA-201ENST00000340541 ZFRQ96KR1 1074 aaKnown RBP16.23■□□□□ 0.19
VAPA-201ENST00000340541 TUBGCP2Q9BSJ2 902 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 NDST4Q9H3R1 872 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CCSER2Q9H7U1 834 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 SIX2Q9NPC8 291 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 OSER1Q9NX31 292 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 RAB23Q9ULC3 237 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 GPR179Q6PRD1 2367 aa16.23■□□□□ 0.19
VAPA-201ENST00000340541 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 LEFTY2O00292 366 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 LRP3O75074 770 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 HOXA6P31267 233 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 LMNB2Q03252 620 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 PDE4CQ08493 712 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 EXOC3L4Q17RC7 722 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 RSPO4Q2I0M5 234 aaPredicted RBP16.22■□□□□ 0.19
VAPA-201ENST00000340541 TCP11X2Q5H9J9 407 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 RAB41Q5JT25 222 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 HECTD3Q5T447 861 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 TXNDC11Q6PKC3 985 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 LCLAT1Q6UWP7 414 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 CCDC186Q7Z3E2 898 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 SCD5Q86SK9 330 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 CHFRQ96EP1 664 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 EBF3Q9H4W6 596 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 UBE2TQ9NPD8 197 aaPredicted RBP16.22■□□□□ 0.19
VAPA-201ENST00000340541 CYLDQ9NQC7 956 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 ANO10Q9NW15 660 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 SMPD4Q9NXE4 827 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 APEX2Q9UBZ4 518 aa16.22■□□□□ 0.19
VAPA-201ENST00000340541 AJAP1Q9UKB5 411 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms