RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 TULP2O00295 520 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 COCHO43405 550 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 FBXO21O94952 628 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 OLFM2O95897 454 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CALCAP01258 141 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 RARGP13631 454 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CLCN1P35523 988 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 STAT1P42224 750 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 GPD2P43304 727 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 RGS7P49802 495 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 KLK7P49862 253 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 PRKCQQ04759 706 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 ADIGQ0VDE8 80 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 PM20D1Q6GTS8 502 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 PMF1Q6P1K2 205 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CACNA2D4Q7Z3S7 1137 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 FMNL3Q8IVF7 1028 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 SUGP1Q8IWZ8 645 aaKnown RBP16.61■□□□□ 0.25
MRPL55-202ENST00000336300 SH3RF2Q8TEC5 729 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 STK32AQ8WU08 396 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 RSPRY1Q96DX4 576 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 ULBP1Q9BZM6 244 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 GANQ9H2C0 597 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CCSER2Q9H7U1 834 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 NLRC4Q9NPP4 1024 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CYLDQ9NQC7 956 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 AJAP1Q9UKB5 411 aaPredicted RBP16.61■□□□□ 0.25
MRPL55-202ENST00000336300 PCDHGC3Q9UN70 934 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 CPQQ9Y646 472 aa16.61■□□□□ 0.25
MRPL55-202ENST00000336300 LEFTY2O00292 366 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 SLC9A3R1O14745 358 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 SART1O43290 800 aaKnown RBP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 TPM3P06753 285 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 CCDC172P0C7W6 258 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 GLULP15104 373 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 TCF3P15923 654 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 YWHAGP61981 247 aaKnown RBP eCLIP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 AMPD2Q01433 879 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 MTF1Q14872 753 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 PDGFRLQ15198 375 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 MLF2Q15773 248 aaPredicted RBP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 BTBD8Q5XKL5 378 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 DENND1BQ6P3S1 775 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 KLHDC10Q6PID8 442 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 C1orf228Q6PIY5 440 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 RSRC2Q7L4I2 434 aaKnown RBP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 SLC47A2Q86VL8 602 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 SCML4Q8N228 414 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 ZNF276Q8N554 614 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 KIAA1958Q8N8K9 716 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 LRRC3BQ96PB8 259 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 ACP6Q9NPH0 428 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 GKN1Q9NS71 199 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 SMPD4Q9NXE4 827 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 DNMT3LQ9UJW3 386 aa16.6■□□□□ 0.25
MRPL55-202ENST00000336300 ZNF638Q14966 1978 aaKnown RBP16.6■□□□□ 0.25
MRPL55-202ENST00000336300 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 MAN2B1O00754 1011 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 TEX33O43247 280 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 PNMA6AP0CW24 399 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 CYP11B1P15538 503 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 SOX5P35711 763 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 IFNAR2P48551 515 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 KPNA1P52294 538 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 MLLT6P55198 1093 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 UBASH3AP57075 661 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 FANCCQ00597 558 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 ZNF77Q15935 545 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 C10orf120Q5SQS8 335 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 FLCNQ8NFG4 579 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 RNF139Q8WU17 664 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 OSCP1Q8WVF1 389 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 IRGQQ8WZA9 623 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 MSANTD3Q96H12 275 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 LRFN3Q9BTN0 628 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 C8orf33Q9H7E9 229 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 HEBP1Q9NRV9 189 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 ABCC13Q9NSE7 274 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 OLA1Q9NTK5 396 aaKnown RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 DUS2Q9NX74 493 aaKnown RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 STRIP2Q9ULQ0 834 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 MRPS17Q9Y2R5 130 aaKnown RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 SH3BP1Q9Y3L3 701 aa16.59■□□□□ 0.25
MRPL55-202ENST00000336300 NUP210Q8TEM1 1887 aaPredicted RBP16.59■□□□□ 0.25
MRPL55-202ENST00000336300 DENND4CQ5VZ89 1909 aa16.58■□□□□ 0.25
MRPL55-202ENST00000336300 A0A1W2PQC6 194 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 GFPT2O94808 682 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 USP4Q13107 963 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 NR1H3Q13133 447 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 NR1I3Q14994 352 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 ZNF852Q6ZMS4 543 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 HFE2Q6ZVN8 426 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 SCD5Q86SK9 330 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 ZNF677Q86XU0 584 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 FBXL6Q8N531 539 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 TMEM35BQ8NCS4 154 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 ATP2A3Q93084 1043 aa16.58■□□□□ 0.24
MRPL55-202ENST00000336300 EXOC4Q96A65 974 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms