RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 KCNQ2O43526 872 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 KLHL2O95198 593 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 POLR2MP0CAP2 368 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 ATP2B4P23634 1241 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 KRT81Q14533 505 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 AOC3Q16853 763 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SEPT12Q8IYM1 358 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 RNF168Q8IYW5 571 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 JDP2Q8WYK2 163 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 GMCL1Q96IK5 515 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SLX1AQ9BQ83 275 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 APOL6Q9BWW8 343 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SLC13A1Q9BZW2 595 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PCDH18Q9HCL0 1135 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 XAB2Q9HCS7 855 aaKnown RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PNPLA8Q9NP80 782 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 FAIMQ9NVQ4 179 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 ARHGEF38Q9NXL2 777 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 GGA1Q9UJY5 639 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 APPL1Q9UKG1 709 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 TBX20Q9UMR3 447 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 CNTNAP4Q9C0A0 1308 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 TCRBV5S1A1TA0A578 114 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SIN3BO75182 1162 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SUPT3HO75486 399 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 CDH2P19022 906 aaPredicted RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 GTF2IP78347 998 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PHEXP78562 749 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PPIDQ08752 370 aaKnown RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 NFIAQ12857 509 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 STX3Q13277 289 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 LPIN1Q14693 890 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SPOPLQ6IQ16 392 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 MAP4K3Q8IVH8 894 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 DEFB107AQ8IZN7 70 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 FBXW8Q8N3Y1 598 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PPM1NQ8N819 430 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 GMCL1P1Q8NEA9 526 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 RSAD2Q8WXG1 361 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 MCEEQ96PE7 176 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PRPF18Q99633 342 aaKnown RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 SHCBP1LQ9BZQ2 653 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 Q9H521 79 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 TBCCD1Q9NVR7 557 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 THAP1Q9NVV9 213 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 DDX56Q9NY93 547 aaKnown RBP13.27□□□□□ -0.29
CCDC60-201ENST00000327554 TUBGCP4Q9UGJ1 667 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 PSMD13Q9UNM6 376 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 AP4B1Q9Y6B7 739 aa13.27□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 E9PBE3 544 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 BIRC5O15392 142 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 SPAG6O75602 509 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 KRT37O76014 449 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 YY1P25490 414 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 GNA15P30679 374 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 NRLP54845 237 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 BASP1P80723 227 aaKnown RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 MPP3Q13368 585 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 CNGA3Q16281 694 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 CDC42EP5Q6NZY7 148 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 LRRC8BQ6P9F7 803 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 BBS5Q8N3I7 341 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 TMEM161BQ8NDZ6 487 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 TFB1MQ8WVM0 346 aaKnown RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 GFM2Q969S9 779 aaKnown RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 CNBD2Q96M20 576 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 KIFC3Q9BVG8 833 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 C6orf203Q9P0P8 240 aaPredicted RBP13.26□□□□□ -0.29
CCDC60-201ENST00000327554 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 EXOC7Q9UPT5 735 aa13.26□□□□□ -0.29
CCDC60-201ENST00000327554 BOLA2-SMG1P6H3BVE0 249 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 CST8O60676 142 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 FBXO21O94952 628 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 SRGAP2CP0DJJ0 459 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 SRGAP2BP0DMP2 458 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 CPA3P15088 417 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 MMP8P22894 467 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 MTTPP55157 894 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 PEX6Q13608 980 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 BMPR2Q13873 1038 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 BRDTQ58F21 947 aaPredicted RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 IYDQ6PHW0 289 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 MIER3Q7Z3K6 550 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 TICAM1Q8IUC6 712 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 DDI1Q8WTU0 396 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 SLC35B4Q969S0 331 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 TEKT1Q969V4 418 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 MMP19Q99542 508 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 SIKE1Q9BRV8 207 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 PRR12Q9ULL5 1215 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 TDRKHQ9Y2W6 561 aaKnown RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 ITM2AO43736 263 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 ADCY3O60266 1144 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 UGT1A9O60656 530 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 AVILO75366 819 aa13.25□□□□□ -0.29
CCDC60-201ENST00000327554 LYPLA1O75608 230 aaPredicted RBP13.25□□□□□ -0.29
CCDC60-201ENST00000327554 P4HBP07237 508 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms