RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 LRRC74BQ6ZQY2 392 aa12.56□□□□□ -0.4
NLRC3-201ENST00000324659 ZCCHC23Q6ZST2 131 aa12.56□□□□□ -0.4
NLRC3-201ENST00000324659 KCNK13Q9HB14 408 aa12.56□□□□□ -0.4
NLRC3-201ENST00000324659 ETNK2Q9NVF9 386 aa12.56□□□□□ -0.4
NLRC3-201ENST00000324659 COPEO14579 308 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 MCF2LO15068 1137 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 UGT1A9O60656 530 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 PSMG1O95456 288 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 GJB1P08034 283 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 NEK3P51956 506 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 ALDH18A1P54886 795 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 ZNF200P98182 395 aaPredicted RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 DRICH1Q6PGQ1 229 aaPredicted RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 CFAP61Q8NHU2 1237 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 FAF2Q96CS3 445 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 PTCD3Q96EY7 689 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 OXNAD1Q96HP4 312 aaPredicted RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 RILPQ96NA2 401 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 UGT1A7Q9HAW7 530 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 UGT1A10Q9HAW8 530 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 UGT1A8Q9HAW9 530 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 SAR1AQ9NR31 198 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 DDX56Q9NY93 547 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 CYTH4Q9UIA0 394 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 HEY1Q9Y5J3 304 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 IQANK1A0A1B0GTG1 560 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 MEI4A8MW99 385 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 E7ENQ6 273 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 ABLIM1O14639 778 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 ZSCAN9O15535 394 aaPredicted RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 KDELR1P24390 212 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 TREML2Q5T2D2 321 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 PCGF5Q86SE9 256 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 MZB1Q8WU39 189 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 PLEKHG4BQ96PX9 1271 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 TRAPPC9Q96Q05 1148 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 RAB6BQ9NRW1 208 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 BRWD3Q6RI45 1802 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 CNTNAP2Q9UHC6 1331 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 TM9SF1O15321 606 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 DKC1O60832 514 aaKnown RBP eCLIP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 USP1O94782 785 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 HNRNPCP07910 306 aaKnown RBP eCLIP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 SLC18A1P54219 525 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 HADHQ16836 314 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 XKR3Q5GH77 459 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 DTNBP1Q96EV8 351 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 DNAJC1Q96KC8 554 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 SRPK1Q96SB4 655 aaKnown RBP12.55□□□□□ -0.4
NLRC3-201ENST00000324659 THTPAQ9BU02 230 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 SHCBP1LQ9BZQ2 653 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 VPS11Q9H270 941 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
NLRC3-201ENST00000324659 A0A0B4J269 797 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 A6NJR5 290 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 C3orf70A6NLC5 250 aaPredicted RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 TXNDC9O14530 226 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 TGFB2P61812 414 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 CLDN10P78369 228 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 DPYSL3Q14195 570 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 GJC2Q5T442 439 aaPredicted RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 SCYL2Q6P3W7 929 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 RNF149Q8NC42 400 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 APOPT1Q96IL0 206 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 CPXM1Q96SM3 734 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 GPATCH2LQ9NWQ4 482 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 ATXN10Q9UBB4 475 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 MAD1L1Q9Y6D9 718 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 CXorf49A8MYA2 514 aaPredicted RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 TRAFD1O14545 582 aaPredicted RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 DLDP09622 509 aaKnown RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 DESP17661 470 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 CDH6P55285 790 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 SLC25A11Q02978 314 aaKnown RBP12.54□□□□□ -0.4
NLRC3-201ENST00000324659 SLFN12LQ6IEE8 588 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 TREML1Q86YW5 311 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 TRIM42Q8IWZ5 723 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 KIAA1217Q5T5P2 1943 aa12.54□□□□□ -0.4
NLRC3-201ENST00000324659 I3L4J1 428 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 LMNAP02545 664 aaKnown RBP12.53□□□□□ -0.4
NLRC3-201ENST00000324659 SPATA31D3P0C874 917 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 MIPP30301 263 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 STAT5BP51692 787 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 SLC34A1Q06495 639 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 CHI3L2Q15782 390 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 LRRC38Q5VT99 294 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 ABHD15Q6UXT9 468 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 SPATA31D4Q6ZUB0 917 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 KBTBD2Q8IY47 623 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.53□□□□□ -0.4
NLRC3-201ENST00000324659 SKA1Q96BD8 255 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 GPRASP2Q96D09 838 aa12.53□□□□□ -0.4
NLRC3-201ENST00000324659 PHACTR1Q9C0D0 580 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms