RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SIX2Q9NPC8 291 aa20.85■□□□□ 0.93
VEGFB-201ENST00000309422 CNGB3Q9NQW8 809 aa20.85■□□□□ 0.93
VEGFB-201ENST00000309422 DUS2Q9NX74 493 aaKnown RBP20.85■□□□□ 0.93
VEGFB-201ENST00000309422 CLIC5Q9NZA1 410 aa20.85■□□□□ 0.93
VEGFB-201ENST00000309422 CCL26Q9Y258 94 aa20.85■□□□□ 0.93
VEGFB-201ENST00000309422 PIAS3Q9Y6X2 628 aa20.85■□□□□ 0.93
VEGFB-201ENST00000309422 A0A1W2PQH9 124 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 RNF225M0QZC1 329 aaPredicted RBP20.84■□□□□ 0.93
VEGFB-201ENST00000309422 LEFTY2O00292 366 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 COCHO43405 550 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 NFATC1O95644 943 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 ZDHHC11BP0C7U3 371 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 RARGP13631 454 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 LCP1P13796 627 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 GLULP15104 373 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 TCF3P15923 654 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 POLR2FP61218 127 aaKnown RBP20.84■□□□□ 0.93
VEGFB-201ENST00000309422 APBA1Q02410 837 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 ZNF77Q15935 545 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 BTBD8Q5XKL5 378 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 KIAA1958Q8N8K9 716 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 MSANTD4Q8NCY6 345 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 IPO4Q8TEX9 1081 aaKnown RBP20.84■□□□□ 0.93
VEGFB-201ENST00000309422 RNF139Q8WU17 664 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 ZNF606Q8WXB4 792 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 STK33Q9BYT3 514 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 ULBP1Q9BZM6 244 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 SYNCQ9H7C4 482 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 HEBP1Q9NRV9 189 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 OLA1Q9NTK5 396 aaKnown RBP20.84■□□□□ 0.93
VEGFB-201ENST00000309422 DNMT3LQ9UJW3 386 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 USP3Q9Y6I4 520 aa20.84■□□□□ 0.93
VEGFB-201ENST00000309422 OLFM2O95897 454 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 CCDC172P0C7W6 258 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 ATP1A3P13637 1013 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 RGS7P49802 495 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 YWHAGP61981 247 aaKnown RBP eCLIP20.83■□□□□ 0.92
VEGFB-201ENST00000309422 KCNMA1Q12791 1236 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 UBXN2BQ14CS0 331 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 ITPRIPL2Q3MIP1 535 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 RAB41Q5JT25 222 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 ASTLQ6HA08 431 aaPredicted RBP20.83■□□□□ 0.92
VEGFB-201ENST00000309422 POTEHQ6S545 545 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 OSCP1Q8WVF1 389 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 RSPRY1Q96DX4 576 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 SLC22A12Q96S37 553 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 NELL2Q99435 816 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 CCSER2Q9H7U1 834 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 CBX8Q9HC52 389 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 C11orf16Q9NQ32 467 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 CYLDQ9NQC7 956 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 CFAP97Q9P2B7 532 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 TBC1D14Q9P2M4 693 aa20.83■□□□□ 0.92
VEGFB-201ENST00000309422 NUP210Q8TEM1 1887 aaPredicted RBP20.82■□□□□ 0.92
VEGFB-201ENST00000309422 F8VZ95 297 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 CLCN5P51795 746 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 KLHDC10Q6PID8 442 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 IRGQQ8WZA9 623 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 ZFYVE19Q96K21 471 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 PRRX2Q99811 253 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 TSPY26PQ9H489 355 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 GKN1Q9NS71 199 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 RASAL2Q9UJF2 1139 aa20.82■□□□□ 0.92
VEGFB-201ENST00000309422 KANSL1LA0AUZ9 987 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 LRRC10BA6NIK2 292 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 FOXN3O00409 490 aaPredicted RBP20.81■□□□□ 0.92
VEGFB-201ENST00000309422 IRF1P10914 325 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 STAT1P42224 750 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 MLLT6P55198 1093 aaPredicted RBP20.81■□□□□ 0.92
VEGFB-201ENST00000309422 RUNX3Q13761 415 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 LUZP1Q86V48 1076 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 FAM71AQ8IYT1 594 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 SLC35F5Q8WV83 523 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 DOCK6Q96HP0 2047 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 ERGIC2Q96RQ1 377 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 NLRC4Q9NPP4 1024 aa20.81■□□□□ 0.92
VEGFB-201ENST00000309422 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.81■□□□□ 0.92
VEGFB-201ENST00000309422 KRBA1A5PL33 1030 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 STARD6P59095 220 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 PKDCCQ504Y2 493 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 RALGPS2Q86X27 583 aaPredicted RBP20.8■□□□□ 0.92
VEGFB-201ENST00000309422 STK32AQ8WU08 396 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 FAM3CQ92520 227 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 FAM149B1Q96BN6 582 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 MIS12Q9H081 205 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 RNF38Q9H0F5 515 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 EBF3Q9H4W6 596 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 ABCC13Q9NSE7 274 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 PCDHGC3Q9UN70 934 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 SIT1Q9Y3P8 196 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 WNT6Q9Y6F9 365 aa20.8■□□□□ 0.92
VEGFB-201ENST00000309422 E2F8A0AVK6 867 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 TULP2O00295 520 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 PDGFBP01127 241 aaPredicted RBP20.79■□□□□ 0.92
VEGFB-201ENST00000309422 CALCAP01258 141 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 AOC1P19801 751 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 MAGEA9P43362 315 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 COG7P83436 770 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 PDCLQ13371 301 aa20.79■□□□□ 0.92
VEGFB-201ENST00000309422 LRRC32Q14392 662 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms