RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 KRT36O76013 467 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 FDX1P10109 184 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 GDF10P55107 478 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 SNRPFP62306 86 aaKnown RBP14.59□□□□□ -0.07
SDC2-201ENST00000302190 COG7P83436 770 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 PTPN11Q06124 597 aaPredicted RBP14.59□□□□□ -0.07
SDC2-201ENST00000302190 USP4Q13107 963 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 TMCO4Q5TGY1 634 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 SNX30Q5VWJ9 437 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 TMEM130Q8N3G9 435 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 RIBC1Q8N443 379 aaPredicted RBP14.59□□□□□ -0.07
SDC2-201ENST00000302190 ANGPTL2Q9UKU9 493 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
SDC2-201ENST00000302190 E5RJQ4 531 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 GSTA2P09210 222 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 RARBP10826 455 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 KIZQ2M2Z5 673 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 PIGWQ7Z7B1 504 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.58□□□□□ -0.076e-7■■□□□ 12.1
SDC2-201ENST00000302190 USP6NLQ92738 828 aa14.58□□□□□ -0.07
SDC2-201ENST00000302190 SRPK1Q96SB4 655 aaKnown RBP14.58□□□□□ -0.07
SDC2-201ENST00000302190 ADARB2Q9NS39 739 aaKnown RBP14.58□□□□□ -0.07
SDC2-201ENST00000302190 SBF1O95248 1867 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 MAFGO15525 162 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 DHX15O43143 795 aaKnown RBP14.58□□□□□ -0.08
SDC2-201ENST00000302190 ZMPSTE24O75844 475 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 PDE5AO76074 875 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 HMGCRP04035 888 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 GARSP41250 739 aaKnown RBP14.58□□□□□ -0.08
SDC2-201ENST00000302190 GLRBP48167 497 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 POU5F1Q01860 360 aaKnown RBP14.58□□□□□ -0.08
SDC2-201ENST00000302190 CAPSQ13938 189 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 TMEM132BQ14DG7 1078 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 TRIP10Q15642 601 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 MTMR14Q8NCE2 650 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 HES2Q9Y543 173 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 KCNK1O00180 336 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 TAP1Q03518 808 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 CACNB2Q08289 660 aaPredicted RBP14.58□□□□□ -0.08
SDC2-201ENST00000302190 VGLL4Q14135 290 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 TEX9Q8N6V9 391 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 TEKT4Q8WW24 435 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 EZH1Q92800 747 aaPredicted RBP14.58□□□□□ -0.08
SDC2-201ENST00000302190 NT5C1AQ9BXI3 368 aa14.58□□□□□ -0.08
SDC2-201ENST00000302190 CYB561D2O14569 222 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 SRGAP2BP0DMP2 458 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 CASP2P42575 452 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 NDST1P52848 882 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 HIC1Q14526 733 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.57□□□□□ -0.08
SDC2-201ENST00000302190 PTPN20Q4JDL3 420 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 C1orf220Q5T0J3 134 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 FNBP1LQ5T0N5 605 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 TTC7BQ86TV6 843 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 TFAP2BQ92481 460 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 MFSD14AQ96MC6 490 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 SHOC2Q9UQ13 582 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ADCY3O60266 1144 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 MOCS2O96007 188 aaPredicted RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 PTPN4P29074 926 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 HSD17B4P51659 736 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 MXD4Q14582 209 aaPredicted RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 SH3PXD2AQ5TCZ1 1133 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 CDCA2Q69YH5 1023 aaPredicted RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 SLC39A4Q6P5W5 647 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 CLPTM1LQ96KA5 538 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 FAM167AQ96KS9 214 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 LAMA3Q16787 3333 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 CRCPO75575 148 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 MT-CO1P00395 513 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 NFICP08651 508 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ENO3P13929 434 aaPredicted RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 KDELR1P24390 212 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 BTKQ06187 659 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ART3Q13508 389 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ALLCQ8N6M5 410 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 TRIM56Q9BRZ2 755 aaKnown RBP14.57□□□□□ -0.08
SDC2-201ENST00000302190 TUBB6Q9BUF5 446 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 ANLNQ9NQW6 1124 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 TSPAN16Q9UKR8 245 aa14.57□□□□□ -0.08
SDC2-201ENST00000302190 hCG_1818297A0A087WSY0 165 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 RTN3O95197 1032 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 F7P08709 466 aaPredicted RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 UBA1P22314 1058 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 ABCD1P33897 745 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 PTDSS1P48651 473 aaKnown RBP14.56□□□□□ -0.08
SDC2-201ENST00000302190 GTF2A2P52657 109 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 BNIP1Q12981 228 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 DPYSL3Q14195 570 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 FAM13CQ8NE31 585 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 CPXM1Q96SM3 734 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 FOXP3Q9BZS1 431 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 R3HDMLQ9H3Y0 253 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 GTSE1Q9NYZ3 720 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 PAK5Q9P286 719 aa14.56□□□□□ -0.08
SDC2-201ENST00000302190 CORO1CQ9ULV4 474 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms