RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 APPL1Q9UKG1 709 aa13.92□□□□□ -0.18
HPS3-201ENST00000296051 PPIL2Q13356 520 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 ARHGAP15Q53QZ3 475 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 CHSY1Q86X52 802 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 GMCL1P1Q8NEA9 526 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 EPS8L1Q8TE68 723 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 PYDC1Q8WXC3 89 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 SDCCAG3Q96C92 435 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 CPB2Q96IY4 423 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 DEFB118Q96PH6 123 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 BTBD10Q9BSF8 475 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 FOXP3Q9BZS1 431 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 CCDC90BQ9GZT6 254 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 KCND2Q9NZV8 630 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 ASTN1O14525 1302 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 WEE1P30291 646 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 SREBF1P36956 1147 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 RPL10AP62906 217 aaKnown RBP13.91□□□□□ -0.18
HPS3-201ENST00000296051 ARSHQ5FYA8 562 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.91□□□□□ -0.18
HPS3-201ENST00000296051 FAM198AQ9UFP1 575 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 UBA6A0AVT1 1052 aaPredicted RBP13.91□□□□□ -0.18
HPS3-201ENST00000296051 CASTOR2A6NHX0 329 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 KPNA7A9QM74 516 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 ANKRD63C9JTQ0 380 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 SULT1E1P49888 294 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 NUDT2P50583 147 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 COPAP53621 1224 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
HPS3-201ENST00000296051 MRPS31Q92665 395 aaKnown RBP13.91□□□□□ -0.18
HPS3-201ENST00000296051 A0A1W2PPM1 405 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 GAS2O43903 313 aaKnown RBP13.91□□□□□ -0.18
HPS3-201ENST00000296051 IL18RAPO95256 599 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 THP07101 528 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 TGFB3P10600 412 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 SERPINB5P36952 375 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 CTXN3Q4LDR2 81 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 RNF220Q5VTB9 566 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 CPNE8Q86YQ8 564 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 DNERQ8NFT8 737 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 BAG5Q9UL15 447 aa13.91□□□□□ -0.18
HPS3-201ENST00000296051 ELK3P41970 407 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 NPTX2P47972 431 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 FLT3LGP49771 235 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 PIGHQ14442 188 aaPredicted RBP13.9□□□□□ -0.18
HPS3-201ENST00000296051 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
HPS3-201ENST00000296051 MCOLN2Q8IZK6 566 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 ING2Q9H160 280 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 KRT82Q9NSB4 513 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 DNAJC16Q9Y2G8 782 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 DTNAQ9Y4J8 743 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 GOLGA4Q13439 2230 aaKnown RBP13.9□□□□□ -0.18
HPS3-201ENST00000296051 E9PBE3 544 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 P4HA2O15460 535 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 KLHL41O60662 606 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 KPNA6O60684 536 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 CAPNS2Q96L46 248 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 CCT7Q99832 543 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 BFARQ9NZS9 450 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 FAM237BA0A1B0GVD1 139 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 OGTO15294 1046 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 SNX17Q15036 470 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 GRIK4Q16099 956 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 SZRD1Q7Z422 152 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 ECHDC2Q86YB7 292 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 FAM13CQ8NE31 585 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 PIK3R5Q8WYR1 880 aa13.9□□□□□ -0.18
HPS3-201ENST00000296051 TIMM13Q9Y5L4 95 aaPredicted RBP13.9□□□□□ -0.18
HPS3-201ENST00000296051 APOL1O14791 398 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 FAM200BP0CF97 657 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 NCAM1P13591 858 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 HARS2P49590 506 aaKnown RBP13.9□□□□□ -0.19
HPS3-201ENST00000296051 TTC27Q6P3X3 843 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 SLC7A14Q8TBB6 771 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 ZC3H15Q8WU90 426 aaKnown RBP13.9□□□□□ -0.19
HPS3-201ENST00000296051 FAM163AQ96GL9 167 aaPredicted RBP13.9□□□□□ -0.19
HPS3-201ENST00000296051 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.19
HPS3-201ENST00000296051 E5RI56 91 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 PRKAR2AP13861 404 aaKnown RBP13.89□□□□□ -0.19
HPS3-201ENST00000296051 PAMP19021 973 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 CUL2Q13617 745 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 WASHC2DQ5SRD0 308 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 EFHBQ8N7U6 833 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 NDFIP2Q9NV92 336 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 SRRM3A6NNA2 597 aaPredicted RBP13.89□□□□□ -0.19
HPS3-201ENST00000296051 TTLL13PA6NNM8 815 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 SLC26A2P50443 739 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 FAAP100Q0VG06 881 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 TWF1Q12792 350 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 FLOT2Q14254 428 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 TFDP3Q5H9I0 405 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 ETNPPLQ8TBG4 499 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 KCNK16Q96T55 309 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 MAGEB5Q9BZ81 275 aa13.89□□□□□ -0.19
HPS3-201ENST00000296051 DPP3Q9NY33 737 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms