RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 MINDY2Q8NBR6 621 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ZNF302Q9NR11 478 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PCDHB2Q9Y5E7 798 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PPP1R3GB7ZBB8 358 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 CRYZL1O95825 349 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 GYS1P13807 737 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 SPRP35270 261 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 STXBP2Q15833 593 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 RBBP7Q16576 425 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 DGUOKQ16854 277 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 LONRF1Q17RB8 773 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 DHDDSQ86SQ9 333 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 OR6P1Q8NGX9 317 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 KLHL32Q96NJ5 620 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TRIM51Q9BSJ1 452 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PCSK1NQ9UHG2 260 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PRR36Q9H6K5 1346 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 C15orf38-AP3S2A0A0A6YYH1 394 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 KIF28PB7ZC32 967 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PSMD11O00231 422 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 COILP38432 576 aaPredicted RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 CD97P48960 835 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ANGPT1Q15389 498 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 QRICH1Q2TAL8 776 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 RNF43Q68DV7 783 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ARPINQ7Z6K5 226 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 EIF1ADQ8N9N8 165 aaKnown RBP5.89□□□□□ -1.47
VCAN-201ENST00000265077 RIN3Q8TB24 985 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ANKS1AQ92625 1134 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 ITPKCQ96DU7 683 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 RAB6BQ9NRW1 208 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 TAGLN3Q9UI15 199 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 PCDHGB4Q9UN71 923 aa5.89□□□□□ -1.47
VCAN-201ENST00000265077 A8MUI8 341 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SNX3O60493 162 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ADSLP30566 484 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 ITGA8P53708 1063 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 KIAA1841Q6NSI8 718 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DDIASQ8IXT1 998 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 TBC1D10AQ9BXI6 508 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SMARCAL1Q9NZC9 954 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 FAM32AQ9Y421 112 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 MROH2AA6NES4 1674 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CES2O00748 559 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SNPHO15079 494 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 PHGDHO43175 533 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 TDP2O95551 362 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SLC29A2Q14542 456 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DMC1Q14565 340 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DOK7Q18PE1 504 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SPDYCQ5MJ68 293 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SH3TC2Q8TF17 1288 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CNDP1Q96KN2 507 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 VPS33BQ9H267 617 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 DHX35Q9H5Z1 703 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 C17orf75Q9HAS0 396 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HSPBP1Q9NZL4 362 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 KDM6AO15550 1401 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 MYMKA6NI61 221 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 USP17L10C9JJH3 530 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ZC3H11AO75152 810 aaKnown RBP eCLIP5.88□□□□□ -1.47
VCAN-201ENST00000265077 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 IL32P24001 234 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 SERPINH1P50454 418 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 ZC3H12BQ5HYM0 836 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 SNX27Q96L92 541 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 TMEM79Q9BSE2 394 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 OSBPL7Q9BZF2 842 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 RUBCNLQ9H714 662 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 RSAD1Q9HA92 442 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 MARCOQ9UEW3 520 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 MINPP1Q9UNW1 487 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 AGAP1Q9UPQ3 857 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 VPS9D1Q9Y2B5 631 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 LTN1O94822 1766 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 TMEM114B3SHH9 223 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 KCNN4O15554 427 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 FCGR1AP12314 374 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 RAG1P15918 1043 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 GTF2H1P32780 548 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 GUCY1A2P33402 732 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 GEMIN4P57678 1058 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 TPI1P60174 286 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 COPZ1P61923 177 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 PPIL6Q8IXY8 311 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CLEC4FQ8N1N0 589 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 C1orf131Q8NDD1 294 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 LMTK2Q8IWU2 1503 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 KANSL1LA0AUZ9 987 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 HADHAP40939 763 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 STX5Q13190 355 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 MXD4Q14582 209 aaPredicted RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 NEDD8Q15843 81 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ZFP1Q6P2D0 407 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 CATSPER4Q7RTX7 472 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 ARHGEF19Q8IW93 802 aa5.88□□□□□ -1.47
VCAN-201ENST00000265077 EPS8L3Q8TE67 593 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 DNAJC1Q96KC8 554 aaKnown RBP5.88□□□□□ -1.47
VCAN-201ENST00000265077 BTBD3Q9Y2F9 522 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms