RNA–Protein interactions for RNA: ENST00000039989.8

TTC17-201, Transcript of tetratricopeptide repeat domain 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC17, Length 4,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-201ENST00000039989 FBXL18Q96ME1 805 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 ZNF558Q96NG5 402 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 KLF6Q99612 283 aaPredicted RBP11.31□□□□□ -0.6
TTC17-201ENST00000039989 AAASQ9NRG9 546 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 HOMER3Q9NSC5 361 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 NDUFAB1O14561 156 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 LTFP02788 710 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 HNRNPH3P31942 346 aaKnown RBP11.31□□□□□ -0.6
TTC17-201ENST00000039989 COILP38432 576 aaPredicted RBP11.31□□□□□ -0.6
TTC17-201ENST00000039989 ITGA8P53708 1063 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 JAM2P57087 298 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 SLMAPQ14BN4 828 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 CDCA2Q69YH5 1023 aaPredicted RBP11.31□□□□□ -0.6
TTC17-201ENST00000039989 RNF135Q8IUD6 432 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 CREG2Q8IUH2 290 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 IPMKQ8NFU5 416 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 FBXO25Q8TCJ0 367 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 PDLIM7Q9NR12 457 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 TBC1D13Q9NVG8 400 aa11.31□□□□□ -0.6
TTC17-201ENST00000039989 MYH9P35579 1960 aaKnown RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 PABPN1LA6NDY0 278 aaKnown RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 RASGRF2O14827 1237 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 GNGT1P63211 74 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 NNTQ13423 1086 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 CENPUQ71F23 418 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SRRM1Q8IYB3 904 aaKnown RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 EFHBQ8N7U6 833 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 MCUQ8NE86 351 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 OR6P1Q8NGX9 317 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 RMDN1Q96DB5 314 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 PWWP2AQ96N64 755 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TKTL2Q9H0I9 626 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 STMN4Q9H169 189 aaPredicted RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 ADAMTS10Q9H324 1103 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 PLK2Q9NYY3 685 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SNX10Q9Y5X0 201 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 NR2E3Q9Y5X4 410 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SF3B1O75533 1304 aaKnown RBP eCLIP11.3□□□□□ -0.69e-7■■■■■ 47.4
TTC17-201ENST00000039989 MCM3APO60318 1980 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TRIOBPQ9H2D6 2365 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 EVPLQ92817 2033 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 USP12O75317 370 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 GPR32O75388 356 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 YWHAQP27348 245 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TPGS1Q6ZTW0 290 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 DENND5BQ6ZUT9 1274 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SERINC5Q86VE9 423 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 BBS5Q8N3I7 341 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 LRRC52Q8N7C0 313 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 ANKRD52Q8NB46 1076 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 CASKIN2Q8WXE0 1202 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TBCBQ99426 244 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 NOCTQ9UK39 431 aaKnown RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 DNPEPQ9ULA0 475 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 STX2P32856 288 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 HARS2P49590 506 aaKnown RBP11.3□□□□□ -0.6
TTC17-201ENST00000039989 ZNF235Q14590 738 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 PSMD5Q16401 504 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 ARFGAP2Q8N6H7 521 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 EXT2Q93063 718 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 FAM136AQ96C01 138 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 SCYL1Q96KG9 808 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 RBM15Q96T37 977 aaKnown RBP eCLIP11.3□□□□□ -0.6
TTC17-201ENST00000039989 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 L2HGDHQ9H9P8 463 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 TRPM5Q9NZQ8 1165 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 DSEQ9UL01 958 aa11.3□□□□□ -0.6
TTC17-201ENST00000039989 JCHAINP01591 159 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 TCF4P15884 667 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 SPARCL1Q14515 664 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 LRRC14Q15048 493 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 AGMOQ6ZNB7 445 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 FIBCD1Q8N539 461 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 ATPAF2Q8N5M1 289 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 CORO1BQ9BR76 489 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 ALG13Q9NP73 1137 aaKnown RBP11.29□□□□□ -0.6
TTC17-201ENST00000039989 CHST12Q9NRB3 414 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 CWC15Q9P013 229 aaKnown RBP11.29□□□□□ -0.6
TTC17-201ENST00000039989 HPCAL4Q9UM19 191 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
TTC17-201ENST00000039989 GOLGA6L7A0A1B0GV03 622 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 HSPA1AP0DMV8 641 aaKnown RBP11.29□□□□□ -0.6
TTC17-201ENST00000039989 HSPA1BP0DMV9 641 aaKnown RBP11.29□□□□□ -0.6
TTC17-201ENST00000039989 PHBP35232 272 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 MSH2P43246 934 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
TTC17-201ENST00000039989 DCLRE1AQ6PJP8 1040 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 ATP11CQ8NB49 1132 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 BORCS6Q96GS4 357 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 STXBP5LQ9Y2K9 1186 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 SLC4A7Q9Y6M7 1214 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 IGKV6-21A0A0C4DH24 114 aa11.29□□□□□ -0.6
TTC17-201ENST00000039989 A0A0U1RQF3 1178 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms