RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 H2afyQ9QZQ8 372 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Itsn2Q9Z0R6 1659 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 NyxP83503 476 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mageb5Q14AN0 366 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Syce2Q505B8 171 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Phf20Q8BLG0 1010 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Wdr35Q8BND3 1181 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ap3m2Q8R2R9 418 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Spag6Q9JLI7 507 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vmn2r31L7N1Z4 861 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Srp54P14576 504 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pyroxd1Q3TMV7 498 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ugt3a1Q3UP75 523 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Thoc5Q8BKT7 683 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fbxo38Q8BMI0 1194 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Fcho1Q8K285 873 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Aim2Q91VJ1 354 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Nos1Q9Z0J4 1429 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm43518A0A0G2JGB6 165 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 D830030K20RikE9PYQ5 218 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gm3043K7N693 218 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gp1bbP56400 206 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vbp1P61759 196 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Znf879Q8BI99 563 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tmed11Q9D2R4 215 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pkn1P70268 946 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pde1aQ61481 565 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Usp49Q6P9L4 685 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Spata21Q8BHW6 681 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rmnd5bQ91YQ7 393 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Exo5Q9CXP9 373 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ndufs3Q9DCT2 263 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 PpieQ9QZH3 301 aaKnown RBP16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kbtbd2G3X9X1 623 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Clca2Q8BG22 942 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Eps8l2Q99K30 729 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tssk3Q9D2E1 268 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ap4b1Q9WV76 738 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Atp10aO54827 1508 aa16.16■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Kcnma1Q08460 1209 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Bpifb5Q3UQ05 490 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Vsx2Q61412 361 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 CrkQ64010 304 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gramd1aQ8VEF1 722 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Glra3Q91XP5 464 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Atp13a1Q9EPE9 1200 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Lrrc38A2VDH3 298 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Men1O88559 611 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 AgtP11859 477 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Klhdc10Q6PAR0 439 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rfx4Q7TNK1 735 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Inpp5bQ8K337 993 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 NwcQ9CQI4 244 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Scgb2b21A0A087WQA9 112 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Serpinh1P19324 417 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdc25aP48964 514 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gpatch4Q3TFK5 415 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Esyt3Q5DTI8 891 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mapre2Q8R001 326 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rabl3Q9D4V7 236 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Prr5lA2AVJ5 370 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Grem2O88273 168 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gjb4Q02738 266 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Susd4Q8BH32 490 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Pop1Q8K205 1045 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tsc22d4Q9EQN3 387 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Smok2bQ9QYZ3 484 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Smok2aQ9QYZ6 504 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 A430078G23RikE9Q7Y4 484 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdh18E9Q9Q6 790 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Xirp1O70373 1129 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tal1P22091 329 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 LtbrP50284 415 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Hsd17b4P51660 735 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Rin3P59729 980 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Stmnd1Q6P3A1 279 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Gpr139Q80UC8 345 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 GsdmcQ99NB5 468 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 TcimQ9D915 106 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Nrf1Q9WU00 503 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Tle6Q9WVB3 581 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mup6A2AV72 179 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 9330159F19RikD3Z623 648 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ass1P16460 412 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Afg1lQ3V384 480 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Nudt16Q6P3D0 195 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Thnsl1Q8BH55 747 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cpsf4Q8BQZ5 211 aaKnown RBP16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Mospd1Q8VEL0 213 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Adgrl2Q8JZZ7 1487 aa16.15■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Sf3b1Q99NB9 1304 aaKnown RBP16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 MttpO08601 894 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Bub1O08901 1058 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Il12bP43432 335 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Uchl4P58321 233 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ezh2Q61188 746 aaKnown RBP16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Q8BGC1 442 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 PyglQ9ET01 850 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Ptpn4Q9WU22 926 aa16.14■□□□□ 0.18
Ubr3-201ENSMUST00000055758 Cdh16O88338 830 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms