RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	MRT4	P33201	236 aa	Known RBP	4.59	□□□□□ -1.67
PEX6	YNL329C	MTO1	P53070	669 aa		4.59	□□□□□ -1.67
PEX6	YNL329C	CLN2	P20438	545 aa		4.59	□□□□□ -1.67
PEX6	YNL329C	ALD3	P54114	506 aa		4.59	□□□□□ -1.67
PEX6	YNL329C	BSC2	Q05611	235 aa		4.59	□□□□□ -1.67
PEX6	YNL329C	APC11	Q12157	165 aa		4.59	□□□□□ -1.67
PEX6	YNL329C	PET112	P33893	541 aa		4.59	□□□□□ -1.68
PEX6	YNL329C	HST3	P53687	447 aa		4.59	□□□□□ -1.68
PEX6	YNL329C	CDC55	Q00362	526 aa		4.59	□□□□□ -1.68
PEX6	YNL329C	HED1	Q03937	162 aa		4.59	□□□□□ -1.68
PEX6	YNL329C	DAL4	Q04895	635 aa		4.59	□□□□□ -1.68
PEX6	YNL329C	VPS35	P34110	944 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	BRN1	P38170	754 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	OCA5	P38738	679 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	DYS1	P38791	387 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	PPG1	P32838	368 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	AHP1	P38013	176 aa	Known RBP	4.58	□□□□□ -1.68
PEX6	YNL329C	CLA4	P48562	842 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	YPQ2	Q06328	317 aa		4.58	□□□□□ -1.68
PEX6	YNL329C	INP54	Q08227	384 aa	Known RBP	4.58	□□□□□ -1.68
PEX6	YNL329C	MCM1	P11746	286 aa		4.57	□□□□□ -1.68
PEX6	YNL329C	YNL165W	P53891	406 aa		4.57	□□□□□ -1.68
PEX6	YNL329C	ESF1	Q06344	628 aa	Known RBP	4.57	□□□□□ -1.68
PEX6	YNL329C	YKL091C	P33324	310 aa	Known RBP	4.57	□□□□□ -1.68
PEX6	YNL329C	ARG82	P07250	355 aa		4.57	□□□□□ -1.68
PEX6	YNL329C	PRE9	P23638	258 aa	Known RBP	4.57	□□□□□ -1.68
PEX6	YNL329C	YOL098C	Q12496	1037 aa		4.57	□□□□□ -1.68
PEX6	YNL329C	DLD1	P32891	587 aa		4.56	□□□□□ -1.68
PEX6	YNL329C	MSN1	P22148	382 aa		4.55	□□□□□ -1.68
PEX6	YNL329C	YBR287W	P38355	427 aa		4.55	□□□□□ -1.68
PEX6	YNL329C	MET32	Q12041	191 aa		4.55	□□□□□ -1.68
PEX6	YNL329C	MON1	P53129	644 aa		4.55	□□□□□ -1.68
PEX6	YNL329C	VPS16	Q03308	798 aa		4.55	□□□□□ -1.68
PEX6	YNL329C	KAP122	P32767	1081 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	ASH1	P34233	588 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	MRPS18	P42847	217 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	FPR4	Q06205	392 aa	Predicted RBP	4.54	□□□□□ -1.68
PEX6	YNL329C	CYC8	P14922	966 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	AMS1	P22855	1083 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	BCK2	P33306	851 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	KTR2	P33550	425 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	BSD2	P38356	321 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	FAA3	P39002	694 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	PSY2	P40164	858 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	YGR122W	P53272	402 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	IOC4	Q04213	475 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	TIF6	Q12522	245 aa	Known RBP	4.54	□□□□□ -1.68
PEX6	YNL329C	RAD2	P07276	1031 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	PRI2	P20457	528 aa		4.54	□□□□□ -1.68
PEX6	YNL329C	IRS4	P36115	615 aa	Known RBP	4.54	□□□□□ -1.68
PEX6	YNL329C	JJJ2	P46997	583 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	RNH70	P53331	553 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	RMD1	Q03441	430 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	CDC53	Q12018	815 aa	Known RBP	4.53	□□□□□ -1.68
PEX6	YNL329C	ISW1	P38144	1129 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	RTT106	P40161	455 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	AIR1	P40507	360 aa	Known RBP	4.53	□□□□□ -1.68
PEX6	YNL329C	GDE1	Q02979	1223 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	TOS4	Q06266	489 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	PIN2	Q12057	282 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	YOR131C	Q12486	218 aa		4.53	□□□□□ -1.68
PEX6	YNL329C	AIM46	P38885	310 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	AAD14	P42884	376 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	IRE1	P32361	1115 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	NTA1	P40354	457 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	YCS4	Q06156	1176 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	UTP4	Q06679	776 aa	Known RBP	4.52	□□□□□ -1.69
PEX6	YNL329C	GIP1	P38229	639 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	RGD2	P43556	714 aa		4.52	□□□□□ -1.69
PEX6	YNL329C	PRP40	P33203	583 aa	Known RBP	4.51	□□□□□ -1.69
PEX6	YNL329C	RSC4	Q02206	625 aa		4.51	□□□□□ -1.69
PEX6	YNL329C	RAS1	P01119	309 aa		4.51	□□□□□ -1.69
PEX6	YNL329C	KAR2	P16474	682 aa	Known RBP	4.51	□□□□□ -1.69
PEX6	YNL329C	SSN3	P39073	555 aa		4.51	□□□□□ -1.69
PEX6	YNL329C	RSM26	P47141	266 aa		4.5	□□□□□ -1.69
PEX6	YNL329C	UGA4	P32837	571 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	SQT1	P35184	431 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	SHM1	P37292	490 aa	Predicted RBP	4.49	□□□□□ -1.69
PEX6	YNL329C	PTK2	P47116	818 aa	Known RBP	4.49	□□□□□ -1.69
PEX6	YNL329C	MCD1	Q12158	566 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	HXK1	P04806	485 aa	Known RBP	4.49	□□□□□ -1.69
PEX6	YNL329C	CDC4	P07834	779 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	MCM5	P29496	775 aa	Known RBP	4.49	□□□□□ -1.69
PEX6	YNL329C	MNR2	P35724	969 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	OSW7	P43611	510 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	MSN5	P52918	1224 aa		4.49	□□□□□ -1.69
PEX6	YNL329C	XDJ1	P39102	459 aa		4.48	□□□□□ -1.69
PEX6	YNL329C	FAA4	P47912	694 aa	Known RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	MRL1	Q06815	381 aa		4.48	□□□□□ -1.69
PEX6	YNL329C	SSF2	Q12153	453 aa	Predicted RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	FLP1	P03870	423 aa		4.48	□□□□□ -1.69
PEX6	YNL329C	PDC6	P26263	563 aa	Known RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	SPC42	P36094	363 aa		4.48	□□□□□ -1.69
PEX6	YNL329C	MSB3	P48566	633 aa	Predicted RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	CUS1	Q02554	436 aa	Predicted RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	TDA5	Q06417	326 aa	Known RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	YOR296W	Q08748	1289 aa		4.48	□□□□□ -1.69
PEX6	YNL329C	FAL1	Q12099	399 aa	Known RBP	4.48	□□□□□ -1.69
PEX6	YNL329C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.47	□□□□□ -1.69	not detected
PEX6	YNL329C	NMD2	P38798	1089 aa	Known RBP	4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms