RNA–Protein interactions for RNA: YMR145C

NDE1, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE1YMR145C ORM1P53224 222 aa8.25□□□□□ -1.09
NDE1YMR145C FMP30Q02883 468 aa8.25□□□□□ -1.09
NDE1YMR145C TSR1Q07381 788 aaKnown RBP8.25□□□□□ -1.09
NDE1YMR145C DNL4Q08387 944 aaPredicted RBP8.25□□□□□ -1.09
NDE1YMR145C IOC2Q12072 812 aa8.25□□□□□ -1.09
NDE1YMR145C CHS5Q12114 671 aaKnown RBP8.25□□□□□ -1.09
NDE1YMR145C GCN2P15442 1659 aa8.25□□□□□ -1.09
NDE1YMR145C PET494P07390 489 aaPredicted RBP8.24□□□□□ -1.09
NDE1YMR145C PET123P17558 318 aa8.24□□□□□ -1.09
NDE1YMR145C TBS1P38114 1094 aa8.24□□□□□ -1.09
NDE1YMR145C UBP14P38237 781 aaKnown RBP8.24□□□□□ -1.09
NDE1YMR145C SSF1P38789 453 aaPredicted RBP8.24□□□□□ -1.09
NDE1YMR145C SPC72P39723 622 aa8.24□□□□□ -1.09
NDE1YMR145C MET18P40469 1032 aa8.24□□□□□ -1.09
NDE1YMR145C FAR11P53917 953 aa8.24□□□□□ -1.09
NDE1YMR145C GYL1Q04322 720 aa8.24□□□□□ -1.09
NDE1YMR145C RKM4Q12504 494 aa8.24□□□□□ -1.09
NDE1YMR145C SWI1P09547 1314 aa8.24□□□□□ -1.09
NDE1YMR145C PDR18P53756 1333 aa8.24□□□□□ -1.09
NDE1YMR145C ROM2P51862 1356 aaKnown RBP8.24□□□□□ -1.09
NDE1YMR145C SEC15P22224 910 aa8.24□□□□□ -1.09
NDE1YMR145C PTH2P34222 208 aa8.24□□□□□ -1.09
NDE1YMR145C YGL081WP53156 320 aa8.24□□□□□ -1.09
NDE1YMR145C ASI1P54074 624 aa8.24□□□□□ -1.09
NDE1YMR145C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09 RIP-Chip
NDE1YMR145C VPS20Q04272 221 aa8.24□□□□□ -1.09
NDE1YMR145C JIP5Q06214 492 aaPredicted RBP8.24□□□□□ -1.09
NDE1YMR145C STU1P38198 1513 aa8.24□□□□□ -1.09
NDE1YMR145C MET5P47169 1442 aa8.23□□□□□ -1.09
NDE1YMR145C CMP2P14747 604 aa8.23□□□□□ -1.09
NDE1YMR145C SEC66P33754 206 aa8.23□□□□□ -1.09
NDE1YMR145C YJR142WP47173 342 aa8.23□□□□□ -1.09
NDE1YMR145C PRP31P49704 494 aaPredicted RBP8.23□□□□□ -1.09
NDE1YMR145C SSQ1Q05931 657 aaPredicted RBP8.23□□□□□ -1.09
NDE1YMR145C SSK2P53599 1579 aa8.23□□□□□ -1.09
NDE1YMR145C NUP159P40477 1460 aa8.22□□□□□ -1.09
NDE1YMR145C PHO84P25297 587 aaKnown RBP8.22□□□□□ -1.09
NDE1YMR145C RPN12P32496 274 aa8.22□□□□□ -1.09
NDE1YMR145C PET112P33893 541 aa8.22□□□□□ -1.09
NDE1YMR145C SLD2P34252 453 aa8.22□□□□□ -1.09
NDE1YMR145C OSH3P38713 996 aaKnown RBP8.22□□□□□ -1.09
NDE1YMR145C MAM1P40065 302 aa8.22□□□□□ -1.09
NDE1YMR145C MAD1P40957 749 aa8.22□□□□□ -1.09
NDE1YMR145C MVP1P40959 511 aaKnown RBP8.22□□□□□ -1.09
NDE1YMR145C LSC1P53598 329 aaKnown RBP8.22□□□□□ -1.09
NDE1YMR145C AAD16Q02895 342 aa8.22□□□□□ -1.09
NDE1YMR145C LCB5Q06147 687 aaKnown RBP8.22□□□□□ -1.09
NDE1YMR145C CLP1Q08685 445 aaPredicted RBP8.22□□□□□ -1.09
NDE1YMR145C VPS35P34110 944 aa8.21□□□□□ -1.09
NDE1YMR145C RFC5P38251 354 aa8.21□□□□□ -1.09
NDE1YMR145C HSM3P38348 480 aa8.21□□□□□ -1.09
NDE1YMR145C ELA1P53861 379 aaPredicted RBP8.21□□□□□ -1.09
NDE1YMR145C PUF6Q04373 656 aaKnown RBP8.21□□□□□ -1.09
NDE1YMR145C FUS2Q05670 677 aa8.21□□□□□ -1.09
NDE1YMR145C YPR097WQ06839 1073 aa8.21□□□□□ -1.09
NDE1YMR145C CMS1Q07897 291 aaKnown RBP8.21□□□□□ -1.09
NDE1YMR145C MPE1P35728 441 aaKnown RBP8.21□□□□□ -1.1
NDE1YMR145C CIC1P38779 376 aaKnown RBP8.21□□□□□ -1.1
NDE1YMR145C GGA2P38817 585 aaKnown RBP8.21□□□□□ -1.1
NDE1YMR145C RPL17BP46990 184 aaKnown RBP8.21□□□□□ -1.1
NDE1YMR145C RSA3Q05942 220 aaKnown RBP8.21□□□□□ -1.1
NDE1YMR145C IQG1Q12280 1495 aa8.2□□□□□ -1.1
NDE1YMR145C SRS2P12954 1174 aa8.2□□□□□ -1.1
NDE1YMR145C CPS1P27614 576 aa8.2□□□□□ -1.1
NDE1YMR145C MFT1P33441 392 aaKnown RBP8.2□□□□□ -1.1
NDE1YMR145C HEL1P36113 551 aa8.2□□□□□ -1.1
NDE1YMR145C SRL3P36167 246 aa8.2□□□□□ -1.1
NDE1YMR145C HXT5P38695 592 aa8.2□□□□□ -1.1
NDE1YMR145C BFA1P47113 574 aa8.2□□□□□ -1.1
NDE1YMR145C CTF4Q01454 927 aa8.2□□□□□ -1.1
NDE1YMR145C SSK22P25390 1331 aaPredicted RBP8.2□□□□□ -1.1
NDE1YMR145C PUF4P25339 888 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
NDE1YMR145C NUP120P35729 1037 aa8.19□□□□□ -1.1
NDE1YMR145C LHS1P36016 881 aa8.19□□□□□ -1.1
NDE1YMR145C RVS167P39743 482 aaKnown RBP8.19□□□□□ -1.1
NDE1YMR145C CIR1P42940 261 aa8.19□□□□□ -1.1
NDE1YMR145C ALD4P46367 519 aaKnown RBP8.19□□□□□ -1.1
NDE1YMR145C ENP2P48234 707 aaKnown RBP8.19□□□□□ -1.1
NDE1YMR145C ARR2Q06597 130 aa8.19□□□□□ -1.1
NDE1YMR145C SMC6Q12749 1114 aa8.19□□□□□ -1.1
NDE1YMR145C AUS1Q08409 1394 aa8.19□□□□□ -1.1
NDE1YMR145C DLD1P32891 587 aa8.18□□□□□ -1.1
NDE1YMR145C NIP100P33420 868 aa8.18□□□□□ -1.1
NDE1YMR145C VID28P40547 921 aa8.18□□□□□ -1.1
NDE1YMR145C OCA1P50946 238 aaPredicted RBP8.18□□□□□ -1.1
NDE1YMR145C LSG1P53145 640 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C YGL082WP53155 381 aa8.18□□□□□ -1.1
NDE1YMR145C KRE33P53914 1056 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C TIM50Q02776 476 aa8.18□□□□□ -1.1
NDE1YMR145C PNG1Q02890 363 aa8.18□□□□□ -1.1
NDE1YMR145C YML108WQ03759 105 aa8.18□□□□□ -1.1
NDE1YMR145C PMT7Q06644 662 aa8.18□□□□□ -1.1
NDE1YMR145C VAM6Q07468 1049 aa8.18□□□□□ -1.1
NDE1YMR145C SLK19Q08581 821 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C ABP140Q08641 628 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C BUD7Q08754 746 aa8.18□□□□□ -1.1
NDE1YMR145C PDR5P33302 1511 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C SUI3P09064 285 aaKnown RBP8.18□□□□□ -1.1
NDE1YMR145C OPI1P21957 404 aa8.18□□□□□ -1.1
NDE1YMR145C PAP1P29468 568 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms