RNA–Protein interactions for RNA: YJL113W

YJL113W, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YJL113W, Length 4,647 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YJL113W	YJL113W	PSK1	P31374	1356 aa		0.51	□□□□□ -2.33
YJL113W	YJL113W	SLH1	P53327	1967 aa	Known RBP	0.5	□□□□□ -2.33
YJL113W	YJL113W	MET10	P39692	1035 aa		0.5	□□□□□ -2.33
YJL113W	YJL113W	MAK10	Q02197	733 aa		0.5	□□□□□ -2.33
YJL113W	YJL113W	AI1	P03875	834 aa		0.5	□□□□□ -2.33
YJL113W	YJL113W	AFT1	P22149	690 aa		0.5	□□□□□ -2.33
YJL113W	YJL113W	ETP1	P38748	585 aa	Known RBP	0.5	□□□□□ -2.33
YJL113W	YJL113W	ADE12	P80210	433 aa	Known RBP	0.5	□□□□□ -2.33
YJL113W	YJL113W	ARG82	P07250	355 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	SIR4	P11978	1358 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	YLR278C	Q05854	1341 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	TOS1	P38288	455 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	STB5	P38699	743 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	YPR204W	Q08995	1032 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	MKS1	P34072	584 aa		0.49	□□□□□ -2.33
YJL113W	YJL113W	KRE33	P53914	1056 aa	Known RBP	0.48	□□□□□ -2.33
YJL113W	YJL113W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	0.48	□□□□□ -2.33	not detected
YJL113W	YJL113W	UTP7	P40055	554 aa	Known RBP	0.47	□□□□□ -2.33
YJL113W	YJL113W	ROG3	P43602	733 aa		0.47	□□□□□ -2.33
YJL113W	YJL113W	RTC1	Q08281	1341 aa		0.47	□□□□□ -2.33
YJL113W	YJL113W	UBP2	Q01476	1272 aa		0.47	□□□□□ -2.33
YJL113W	YJL113W	COQ2	P32378	372 aa		0.47	□□□□□ -2.33
YJL113W	YJL113W	UBP14	P38237	781 aa	Known RBP	0.47	□□□□□ -2.33
YJL113W	YJL113W	FOX2	Q02207	900 aa	Known RBP	0.47	□□□□□ -2.33
YJL113W	YJL113W	IPL1	P38991	367 aa		0.46	□□□□□ -2.34
YJL113W	YJL113W	AKR1	P39010	764 aa		0.46	□□□□□ -2.34
YJL113W	YJL113W	RAD9	P14737	1309 aa		0.46	□□□□□ -2.34
YJL113W	YJL113W	GAS5	Q08193	484 aa		0.46	□□□□□ -2.34
YJL113W	YJL113W	ARG8	P18544	423 aa		0.45	□□□□□ -2.34
YJL113W	YJL113W	ESS1	P22696	170 aa		0.45	□□□□□ -2.34
YJL113W	YJL113W	PHM7	Q12252	991 aa		0.45	□□□□□ -2.34
YJL113W	YJL113W	YPL034W	Q03083	165 aa		0.45	□□□□□ -2.34
YJL113W	YJL113W	BDS1	Q08347	646 aa		0.45	□□□□□ -2.34
YJL113W	YJL113W	NUP85	P46673	744 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	CCT8	P47079	568 aa	Known RBP	0.44	□□□□□ -2.34
YJL113W	YJL113W	YMR074C	Q04773	145 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	YPR117W	Q06116	2489 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	YAP3	P38749	330 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	CSC1	Q06538	782 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	YJR098C	P47139	656 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	WSC4	P38739	605 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	ALR1	Q08269	859 aa		0.44	□□□□□ -2.34
YJL113W	YJL113W	THI12	P42883	340 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	THI5	P43534	340 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	THI11	P47183	340 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	THI13	Q07748	340 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	DLD3	P39976	496 aa	Known RBP	0.43	□□□□□ -2.34
YJL113W	YJL113W	AAD14	P42884	376 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	NST1	P53935	1240 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	PSH1	Q12161	406 aa		0.43	□□□□□ -2.34
YJL113W	YJL113W	RPO41	P13433	1351 aa	Known RBP	0.43	□□□□□ -2.34
YJL113W	YJL113W	IRC24	P40580	263 aa		0.42	□□□□□ -2.34
YJL113W	YJL113W	ROM2	P51862	1356 aa	Known RBP	0.42	□□□□□ -2.34
YJL113W	YJL113W	TY1A-BL	Q12266	440 aa		0.42	□□□□□ -2.34
YJL113W	YJL113W	TFB4	Q12004	338 aa		0.42	□□□□□ -2.34
YJL113W	YJL113W	PEP7	P32609	515 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	MOT2	P34909	587 aa	Known RBP	0.41	□□□□□ -2.34
YJL113W	YJL113W	AMN1	P38285	549 aa	Predicted RBP	0.41	□□□□□ -2.34
YJL113W	YJL113W	LSB6	P42951	607 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	SDH1	Q00711	640 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	STB3	Q12427	513 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	KRE5	P22023	1365 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	PKH3	Q03306	898 aa	Predicted RBP	0.41	□□□□□ -2.34
YJL113W	YJL113W	IKI3	Q06706	1349 aa	Known RBP	0.41	□□□□□ -2.34
YJL113W	YJL113W	YJU3	P28321	313 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	OSH7	P38755	437 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	HXT10	P43581	546 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	YJL181W	P46987	611 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	CUZ1	P53899	274 aa		0.41	□□□□□ -2.34
YJL113W	YJL113W	NAM8	Q00539	523 aa	Known RBP	0.41	□□□□□ -2.34
YJL113W	YJL113W	AHP1	P38013	176 aa	Known RBP	0.4	□□□□□ -2.35
YJL113W	YJL113W	DOT5	P40553	215 aa		0.4	□□□□□ -2.35
YJL113W	YJL113W	MVP1	P40959	511 aa	Known RBP	0.4	□□□□□ -2.35
YJL113W	YJL113W	YGR130C	P53278	816 aa		0.4	□□□□□ -2.35
YJL113W	YJL113W	SPB4	P25808	606 aa	Predicted RBP	0.4	□□□□□ -2.35
YJL113W	YJL113W	GLY1	P37303	387 aa	Known RBP	0.4	□□□□□ -2.35
YJL113W	YJL113W	PDC1	P06169	563 aa	Known RBP	0.4	□□□□□ -2.35
YJL113W	YJL113W	ISF1	P32488	338 aa		0.4	□□□□□ -2.35
YJL113W	YJL113W	KTR7	P40504	517 aa		0.4	□□□□□ -2.35
YJL113W	YJL113W	TRM1	P15565	570 aa	Known RBP	0.39	□□□□□ -2.35
YJL113W	YJL113W	ACO2	P39533	789 aa		0.39	□□□□□ -2.35
YJL113W	YJL113W	FPS1	P23900	669 aa		0.39	□□□□□ -2.35
YJL113W	YJL113W	RNQ1	P25367	405 aa		0.39	□□□□□ -2.35
YJL113W	YJL113W	FAB1	P34756	2278 aa		0.39	□□□□□ -2.35
YJL113W	YJL113W	CPS1	P27614	576 aa		0.39	□□□□□ -2.35
YJL113W	YJL113W	ERT1	P38140	529 aa		0.38	□□□□□ -2.35
YJL113W	YJL113W	PPH3	P32345	308 aa		0.38	□□□□□ -2.35
YJL113W	YJL113W	TY1A-MR1	Q04215	440 aa		0.38	□□□□□ -2.35
YJL113W	YJL113W	NAM7	P30771	971 aa	Known RBP	0.38	□□□□□ -2.35
YJL113W	YJL113W	ALG14	P38242	237 aa		0.38	□□□□□ -2.35
YJL113W	YJL113W	RGR1	P19263	1082 aa		0.37	□□□□□ -2.35
YJL113W	YJL113W	MRPL16	P38064	232 aa		0.37	□□□□□ -2.35
YJL113W	YJL113W	REF2	P42073	533 aa	Predicted RBP	0.37	□□□□□ -2.35
YJL113W	YJL113W	LGE1	Q02796	332 aa	Known RBP	0.37	□□□□□ -2.35
YJL113W	YJL113W	POL12	P38121	705 aa	Predicted RBP	0.37	□□□□□ -2.35
YJL113W	YJL113W	SSA1	P10591	642 aa	Known RBP	0.37	□□□□□ -2.35
YJL113W	YJL113W	SAF1	P38352	637 aa		0.37	□□□□□ -2.35
YJL113W	YJL113W	YJR008W	P47085	338 aa		0.37	□□□□□ -2.35
YJL113W	YJL113W	TEA1	P47988	759 aa		0.37	□□□□□ -2.35
YJL113W	YJL113W	ATF2	P53296	535 aa		0.37	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms