RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W DPH6Q12429 685 aa6.77□□□□□ -1.32
DEG1YFL001W FBP26P32604 452 aa6.76□□□□□ -1.33
DEG1YFL001W APP1P53933 587 aa6.76□□□□□ -1.33
DEG1YFL001W RPB10P22139 70 aa6.76□□□□□ -1.33
DEG1YFL001W AAD14P42884 376 aa6.76□□□□□ -1.33
DEG1YFL001W FOX2Q02207 900 aaKnown RBP6.76□□□□□ -1.33
DEG1YFL001W FPR4Q06205 392 aaPredicted RBP6.76□□□□□ -1.33
DEG1YFL001W TBS1P38114 1094 aa6.75□□□□□ -1.33
DEG1YFL001W DAT1P13483 248 aaKnown RBP6.74□□□□□ -1.33
DEG1YFL001W RPT1P33299 467 aaKnown RBP6.74□□□□□ -1.33
DEG1YFL001W MKS1P34072 584 aa6.74□□□□□ -1.33
DEG1YFL001W HXT5P38695 592 aa6.74□□□□□ -1.33
DEG1YFL001W RMD1Q03441 430 aa6.74□□□□□ -1.33
DEG1YFL001W MCM1P11746 286 aa6.73□□□□□ -1.33
DEG1YFL001W STE6P12866 1290 aa6.73□□□□□ -1.33
DEG1YFL001W GCD6P32501 712 aaKnown RBP6.73□□□□□ -1.33
DEG1YFL001W KTR2P33550 425 aa6.73□□□□□ -1.33
DEG1YFL001W DAK2P43550 591 aa6.73□□□□□ -1.33
DEG1YFL001W PHM7Q12252 991 aa6.73□□□□□ -1.33
DEG1YFL001W RPP2BP02400 110 aaKnown RBP6.72□□□□□ -1.33
DEG1YFL001W MCM2P29469 868 aa6.72□□□□□ -1.33
DEG1YFL001W ROG3P43602 733 aa6.72□□□□□ -1.33
DEG1YFL001W YJR098CP47139 656 aa6.72□□□□□ -1.33
DEG1YFL001W DOS2P54858 310 aa6.72□□□□□ -1.33
DEG1YFL001W YPQ2Q06328 317 aa6.72□□□□□ -1.33
DEG1YFL001W BDS1Q08347 646 aa6.72□□□□□ -1.33
DEG1YFL001W WTM2Q12206 467 aa6.72□□□□□ -1.33
DEG1YFL001W MRPL33P20084 86 aa6.71□□□□□ -1.34
DEG1YFL001W VPS35P34110 944 aa6.71□□□□□ -1.34
DEG1YFL001W MDJ1P35191 511 aa6.71□□□□□ -1.34
DEG1YFL001W BRN1P38170 754 aa6.71□□□□□ -1.34
DEG1YFL001W YBL086CP38177 466 aa6.71□□□□□ -1.34
DEG1YFL001W CDC55Q00362 526 aa6.71□□□□□ -1.34
DEG1YFL001W TY1A-MR1Q04215 440 aa6.71□□□□□ -1.34
DEG1YFL001W SPR28Q04921 423 aa6.71□□□□□ -1.34
DEG1YFL001W YNL011CP53980 444 aa6.7□□□□□ -1.34
DEG1YFL001W TCB1Q12466 1186 aa6.7□□□□□ -1.34
DEG1YFL001W YOL098CQ12496 1037 aa6.7□□□□□ -1.34
DEG1YFL001W SCD5P34758 872 aa6.69□□□□□ -1.34
DEG1YFL001W OSH7P38755 437 aa6.69□□□□□ -1.34
DEG1YFL001W LYS5P50113 272 aa6.69□□□□□ -1.34
DEG1YFL001W SUT1P53032 299 aaKnown RBP6.69□□□□□ -1.34
DEG1YFL001W VPS16Q03308 798 aa6.69□□□□□ -1.34
DEG1YFL001W PIN2Q12057 282 aa6.69□□□□□ -1.34
DEG1YFL001W DLD1P32891 587 aa6.68□□□□□ -1.34
DEG1YFL001W SAM37P50110 327 aa6.68□□□□□ -1.34
DEG1YFL001W ALD3P54114 506 aa6.68□□□□□ -1.34
DEG1YFL001W DFG5Q05031 458 aa6.68□□□□□ -1.34
DEG1YFL001W CLN2P20438 545 aa6.67□□□□□ -1.34
DEG1YFL001W SMC1P32908 1225 aa6.67□□□□□ -1.34
DEG1YFL001W SPC42P36094 363 aa6.67□□□□□ -1.34
DEG1YFL001W NMD2P38798 1089 aaKnown RBP6.67□□□□□ -1.34
DEG1YFL001W VAC8P39968 578 aa6.67□□□□□ -1.34
DEG1YFL001W MAD1P40957 749 aa6.67□□□□□ -1.34
DEG1YFL001W SUM1P46676 1062 aa6.67□□□□□ -1.34
DEG1YFL001W ALD6P54115 500 aaKnown RBP6.67□□□□□ -1.34
DEG1YFL001W CCP1P00431 361 aa6.66□□□□□ -1.34
DEG1YFL001W RPS26AP39938 119 aaKnown RBP6.66□□□□□ -1.34
DEG1YFL001W RPS26BP39939 119 aaKnown RBP6.66□□□□□ -1.34
DEG1YFL001W YGR122WP53272 402 aa6.66□□□□□ -1.34
DEG1YFL001W RSC4Q02206 625 aa6.66□□□□□ -1.34
DEG1YFL001W ESF1Q06344 628 aaKnown RBP6.66□□□□□ -1.34
DEG1YFL001W VMA3P25515 160 aa6.65□□□□□ -1.35
DEG1YFL001W CIC1P38779 376 aaKnown RBP6.65□□□□□ -1.35
DEG1YFL001W HXT8P40886 569 aa6.65□□□□□ -1.35
DEG1YFL001W NRD1P53617 575 aaKnown RBP RIP-Chip data6.65□□□□□ -1.35 RIP-Chip
DEG1YFL001W YAF9P53930 226 aa6.65□□□□□ -1.35
DEG1YFL001W UTP4Q06679 776 aaKnown RBP6.65□□□□□ -1.35
DEG1YFL001W CYC8P14922 966 aa6.64□□□□□ -1.35
DEG1YFL001W PEP7P32609 515 aa6.64□□□□□ -1.35
DEG1YFL001W UTP7P40055 554 aaKnown RBP6.64□□□□□ -1.35
DEG1YFL001W OXR1Q08952 273 aa6.64□□□□□ -1.35
DEG1YFL001W MNR2P35724 969 aa6.63□□□□□ -1.35
DEG1YFL001W JJJ3P47138 172 aa6.63□□□□□ -1.35
DEG1YFL001W NOC3Q07896 663 aaPredicted RBP6.63□□□□□ -1.35
DEG1YFL001W LDH1P38139 375 aa6.62□□□□□ -1.35
DEG1YFL001W DLD3P39976 496 aaKnown RBP6.62□□□□□ -1.35
DEG1YFL001W BSC2Q05611 235 aa6.62□□□□□ -1.35
DEG1YFL001W SSF2Q12153 453 aaPredicted RBP6.62□□□□□ -1.35
DEG1YFL001W HXK1P04806 485 aaKnown RBP6.61□□□□□ -1.35
DEG1YFL001W YJL049WP47048 450 aa6.61□□□□□ -1.35
DEG1YFL001W TOS4Q06266 489 aa6.61□□□□□ -1.35
DEG1YFL001W RAD2P07276 1031 aa6.6□□□□□ -1.35
DEG1YFL001W DYS1P38791 387 aa6.6□□□□□ -1.35
DEG1YFL001W RAD55P38953 406 aa6.6□□□□□ -1.35
DEG1YFL001W NTA1P40354 457 aa6.6□□□□□ -1.35
DEG1YFL001W IOC3P43596 787 aa6.6□□□□□ -1.35
DEG1YFL001W Q0182Q9ZZW1 134 aa6.6□□□□□ -1.35
DEG1YFL001W SRP40P32583 406 aaPredicted RBP6.59□□□□□ -1.35
DEG1YFL001W PET112P33893 541 aa6.59□□□□□ -1.35
DEG1YFL001W RNH70P53331 553 aa6.59□□□□□ -1.35
DEG1YFL001W YNL165WP53891 406 aa6.59□□□□□ -1.35
DEG1YFL001W FAA3P39002 694 aa6.58□□□□□ -1.36
DEG1YFL001W RGD2P43556 714 aa6.58□□□□□ -1.36
DEG1YFL001W NSG2P53898 299 aa6.58□□□□□ -1.36
DEG1YFL001W WRS1Q12109 432 aaKnown RBP6.58□□□□□ -1.36
DEG1YFL001W MSN1P22148 382 aa6.57□□□□□ -1.36
DEG1YFL001W IRS4P36115 615 aaKnown RBP6.57□□□□□ -1.36
DEG1YFL001W QDR2P40474 542 aa6.57□□□□□ -1.36
DEG1YFL001W FAR11P53917 953 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms