RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YOR131CQ12486 218 aa1.88□□□□□ -2.11
SWI4YER111C VMA3P25515 160 aa1.88□□□□□ -2.11
SWI4YER111C UGA3P26370 528 aa1.88□□□□□ -2.11
SWI4YER111C VPS35P34110 944 aa1.88□□□□□ -2.11
SWI4YER111C OCA5P38738 679 aa1.88□□□□□ -2.11
SWI4YER111C RAD55P38953 406 aa1.88□□□□□ -2.11
SWI4YER111C HXT8P40886 569 aa1.88□□□□□ -2.11
SWI4YER111C DAL4Q04895 635 aa1.88□□□□□ -2.11
SWI4YER111C MAG2Q06436 670 aaKnown RBP1.88□□□□□ -2.11
SWI4YER111C SSK2P53599 1579 aa1.88□□□□□ -2.11
SWI4YER111C STE6P12866 1290 aa1.87□□□□□ -2.11
SWI4YER111C PET112P33893 541 aa1.87□□□□□ -2.11
SWI4YER111C MTO1P53070 669 aa1.87□□□□□ -2.11
SWI4YER111C FPR4Q06205 392 aaPredicted RBP1.87□□□□□ -2.11
SWI4YER111C ESF1Q06344 628 aaKnown RBP1.87□□□□□ -2.11
SWI4YER111C CDC53Q12018 815 aaKnown RBP1.87□□□□□ -2.11
SWI4YER111C SRF1Q12516 437 aa1.87□□□□□ -2.11
SWI4YER111C SPA2P23201 1466 aaKnown RBP1.87□□□□□ -2.11
SWI4YER111C YBR287WP38355 427 aa1.87□□□□□ -2.11
SWI4YER111C QDR2P40474 542 aa1.87□□□□□ -2.11
SWI4YER111C MRPS18P42847 217 aa1.87□□□□□ -2.11
SWI4YER111C SUM1P46676 1062 aa1.87□□□□□ -2.11
SWI4YER111C PRI2P20457 528 aa1.86□□□□□ -2.11
SWI4YER111C SCD5P34758 872 aa1.86□□□□□ -2.11
SWI4YER111C MON1P53129 644 aa1.86□□□□□ -2.11
SWI4YER111C INP54Q08227 384 aaKnown RBP1.86□□□□□ -2.11
SWI4YER111C YBL086CP38177 466 aa1.86□□□□□ -2.11
SWI4YER111C DYS1P38791 387 aa1.86□□□□□ -2.11
SWI4YER111C RTT106P40161 455 aa1.86□□□□□ -2.11
SWI4YER111C OSW7P43611 510 aa1.86□□□□□ -2.11
SWI4YER111C HST3P53687 447 aa1.86□□□□□ -2.11
SWI4YER111C CDC55Q00362 526 aa1.86□□□□□ -2.11
SWI4YER111C VPS16Q03308 798 aa1.86□□□□□ -2.11
SWI4YER111C BSC2Q05611 235 aa1.86□□□□□ -2.11
SWI4YER111C ARG82P07250 355 aa1.86□□□□□ -2.11
SWI4YER111C AHP1P38013 176 aaKnown RBP1.86□□□□□ -2.11
SWI4YER111C HXT5P38695 592 aa1.86□□□□□ -2.11
SWI4YER111C GDE1Q02979 1223 aa1.86□□□□□ -2.11
SWI4YER111C RAD2P07276 1031 aa1.85□□□□□ -2.11
SWI4YER111C MLF3P32047 452 aa1.85□□□□□ -2.11
SWI4YER111C KAP122P32767 1081 aa1.85□□□□□ -2.11
SWI4YER111C NMD2P38798 1089 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C THO2P53552 1597 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C YAF9P53930 226 aa1.85□□□□□ -2.11
SWI4YER111C RMD1Q03441 430 aa1.85□□□□□ -2.11
SWI4YER111C YCS4Q06156 1176 aa1.85□□□□□ -2.11
SWI4YER111C APC11Q12157 165 aa1.85□□□□□ -2.11
SWI4YER111C MCM1P11746 286 aa1.85□□□□□ -2.11
SWI4YER111C CYC8P14922 966 aa1.85□□□□□ -2.11
SWI4YER111C KAR2P16474 682 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C MSN1P22148 382 aa1.85□□□□□ -2.11
SWI4YER111C DLD1P32891 587 aa1.85□□□□□ -2.11
SWI4YER111C RRP14P36080 434 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C YGR122WP53272 402 aa1.85□□□□□ -2.11
SWI4YER111C YNL165WP53891 406 aa1.85□□□□□ -2.11
SWI4YER111C PIN2Q12057 282 aa1.85□□□□□ -2.11
SWI4YER111C BAS1P22035 811 aa1.85□□□□□ -2.11
SWI4YER111C MRT4P33201 236 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C SQT1P35184 431 aa1.85□□□□□ -2.11
SWI4YER111C IRS4P36115 615 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C AIM46P38885 310 aa1.85□□□□□ -2.11
SWI4YER111C FAA3P39002 694 aa1.85□□□□□ -2.11
SWI4YER111C PSY2P40164 858 aa1.85□□□□□ -2.11
SWI4YER111C HED1Q03937 162 aa1.85□□□□□ -2.11
SWI4YER111C TDA5Q06417 326 aaKnown RBP1.85□□□□□ -2.11
SWI4YER111C IRC20Q06554 1556 aa1.84□□□□□ -2.11
SWI4YER111C RAD27P26793 382 aa1.84□□□□□ -2.11
SWI4YER111C PRP40P33203 583 aaKnown RBP1.84□□□□□ -2.11
SWI4YER111C ASH1P34233 588 aa1.84□□□□□ -2.11
SWI4YER111C SPC42P36094 363 aa1.84□□□□□ -2.11
SWI4YER111C TIM54P47045 478 aa1.84□□□□□ -2.11
SWI4YER111C RSM26P47141 266 aa1.84□□□□□ -2.11
SWI4YER111C YPQ2Q06328 317 aa1.84□□□□□ -2.11
SWI4YER111C STI1P15705 589 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
SWI4YER111C GRX1P25373 110 aaKnown RBP1.84□□□□□ -2.12
SWI4YER111C MNR2P35724 969 aa1.84□□□□□ -2.12
SWI4YER111C ISW1P38144 1129 aa1.84□□□□□ -2.12
SWI4YER111C BSD2P38356 321 aa1.84□□□□□ -2.12
SWI4YER111C FAA4P47912 694 aaKnown RBP1.84□□□□□ -2.12
SWI4YER111C CLA4P48562 842 aa1.84□□□□□ -2.12
SWI4YER111C TOS4Q06266 489 aa1.84□□□□□ -2.12
SWI4YER111C FAL1Q12099 399 aaKnown RBP1.84□□□□□ -2.12
SWI4YER111C TIF6Q12522 245 aaKnown RBP1.84□□□□□ -2.12
SWI4YER111C DNA2P38859 1522 aa1.84□□□□□ -2.12
SWI4YER111C SDH2P21801 266 aa1.83□□□□□ -2.12
SWI4YER111C MCM5P29496 775 aaKnown RBP1.83□□□□□ -2.12
SWI4YER111C IRE1P32361 1115 aa1.83□□□□□ -2.12
SWI4YER111C NTA1P40354 457 aa1.83□□□□□ -2.12
SWI4YER111C HUL5P53119 910 aa1.83□□□□□ -2.12
SWI4YER111C UBP3Q01477 912 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12 RIP-Chip
SWI4YER111C RSC4Q02206 625 aa1.83□□□□□ -2.12
SWI4YER111C MRL1Q06815 381 aa1.83□□□□□ -2.12
SWI4YER111C MCD1Q12158 566 aa1.83□□□□□ -2.12
SWI4YER111C GIP1P38229 639 aa1.83□□□□□ -2.12
SWI4YER111C PEX13P80667 386 aa1.83□□□□□ -2.12
SWI4YER111C NSE3Q05541 303 aa1.83□□□□□ -2.12
SWI4YER111C HXK1P04806 485 aaKnown RBP1.83□□□□□ -2.12
SWI4YER111C MET6P05694 767 aaKnown RBP1.83□□□□□ -2.12
SWI4YER111C CIT2P08679 460 aa1.83□□□□□ -2.12
SWI4YER111C RAD4P14736 754 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms