RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C RPS6AP0CX37 236 aaKnown RBP3.63□□□□□ -1.83
SOK1YDR006C RPS6BP0CX38 236 aaPredicted RBP3.63□□□□□ -1.83
SOK1YDR006C TAF13P11747 167 aa3.63□□□□□ -1.83
SOK1YDR006C TGL2P54857 326 aa3.63□□□□□ -1.83
SOK1YDR006C FUR4P05316 633 aaKnown RBP3.63□□□□□ -1.83
SOK1YDR006C NAB2P32505 525 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SOK1YDR006C UBP12P39538 1254 aa3.63□□□□□ -1.83
SOK1YDR006C KIP3P53086 805 aaKnown RBP3.63□□□□□ -1.83
SOK1YDR006C ISC10P32645 267 aa3.62□□□□□ -1.83
SOK1YDR006C FUI1P38196 639 aa3.62□□□□□ -1.83
SOK1YDR006C BDP1P46678 594 aa3.62□□□□□ -1.83
SOK1YDR006C YJR142WP47173 342 aa3.62□□□□□ -1.83
SOK1YDR006C TRS120Q04183 1289 aa3.62□□□□□ -1.83
SOK1YDR006C POL5P39985 1022 aaKnown RBP3.62□□□□□ -1.83
SOK1YDR006C THI12P42883 340 aa3.62□□□□□ -1.83
SOK1YDR006C THI5P43534 340 aa3.62□□□□□ -1.83
SOK1YDR006C THI11P47183 340 aa3.62□□□□□ -1.83
SOK1YDR006C KXD1P53158 218 aa3.62□□□□□ -1.83
SOK1YDR006C THI13Q07748 340 aa3.62□□□□□ -1.83
SOK1YDR006C ISU1Q03020 165 aa3.61□□□□□ -1.83
SOK1YDR006C GIR2Q03768 265 aaPredicted RBP3.61□□□□□ -1.83
SOK1YDR006C CYT1P07143 309 aa3.61□□□□□ -1.83
SOK1YDR006C VAN1P23642 535 aa3.61□□□□□ -1.83
SOK1YDR006C TSR4P25040 408 aa3.61□□□□□ -1.83
SOK1YDR006C YHR020WP38708 688 aaKnown RBP3.61□□□□□ -1.83
SOK1YDR006C CLA4P48562 842 aa3.61□□□□□ -1.83
SOK1YDR006C SPT2P06843 333 aaPredicted RBP3.6□□□□□ -1.83
SOK1YDR006C RPT1P33299 467 aaKnown RBP3.6□□□□□ -1.83
SOK1YDR006C AIM21P40563 679 aa3.6□□□□□ -1.83
SOK1YDR006C FOX2Q02207 900 aaKnown RBP3.6□□□□□ -1.83
SOK1YDR006C COBP00163 385 aa3.6□□□□□ -1.83
SOK1YDR006C NNF1P47149 201 aa3.6□□□□□ -1.83
SOK1YDR006C SSB1P11484 613 aaKnown RBP3.59□□□□□ -1.83
SOK1YDR006C UGA4P32837 571 aa3.59□□□□□ -1.83
SOK1YDR006C DUR3P33413 735 aa3.59□□□□□ -1.83
SOK1YDR006C FAA3P39002 694 aa3.59□□□□□ -1.83
SOK1YDR006C SSB2P40150 613 aaKnown RBP3.59□□□□□ -1.83
SOK1YDR006C JIP5Q06214 492 aaPredicted RBP3.59□□□□□ -1.83
SOK1YDR006C BDF2Q07442 638 aa3.59□□□□□ -1.83
SOK1YDR006C HIF1Q12373 385 aa3.59□□□□□ -1.83
SOK1YDR006C RPS31P05759 152 aaKnown RBP3.59□□□□□ -1.83
SOK1YDR006C FBP26P32604 452 aa3.59□□□□□ -1.83
SOK1YDR006C STE6P12866 1290 aa3.58□□□□□ -1.84
SOK1YDR006C YBL086CP38177 466 aa3.58□□□□□ -1.84
SOK1YDR006C VAC8P39968 578 aa3.58□□□□□ -1.84
SOK1YDR006C CTR9P89105 1077 aa3.58□□□□□ -1.84
SOK1YDR006C VPS16Q03308 798 aa3.58□□□□□ -1.84
SOK1YDR006C NSE3Q05541 303 aa3.58□□□□□ -1.84
SOK1YDR006C SNU66Q12420 587 aaPredicted RBP3.58□□□□□ -1.84
SOK1YDR006C SHM1P37292 490 aaPredicted RBP3.58□□□□□ -1.84
SOK1YDR006C PBP2P38151 413 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
SOK1YDR006C RGD2P43556 714 aa3.58□□□□□ -1.84
SOK1YDR006C PEX8P53248 589 aa3.58□□□□□ -1.84
SOK1YDR006C ALD6P54115 500 aaKnown RBP3.58□□□□□ -1.84
SOK1YDR006C YOR378WQ08902 515 aa3.58□□□□□ -1.84
SOK1YDR006C MRPL33P20084 86 aa3.57□□□□□ -1.84
SOK1YDR006C GBP2P25555 427 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
SOK1YDR006C SPT16P32558 1035 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C MRT4P33201 236 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C RRP14P36080 434 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C PAF1P38351 445 aa3.57□□□□□ -1.84
SOK1YDR006C RPS26AP39938 119 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C RPS26BP39939 119 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C UTP7P40055 554 aaKnown RBP3.57□□□□□ -1.84
SOK1YDR006C ATG3P40344 310 aa3.57□□□□□ -1.84
SOK1YDR006C PIN2Q12057 282 aa3.57□□□□□ -1.84
SOK1YDR006C VPS5Q92331 675 aa3.57□□□□□ -1.84
SOK1YDR006C TRS33Q99394 268 aa3.57□□□□□ -1.84
SOK1YDR006C TY4A-JP47023 414 aa3.57□□□□□ -1.84
SOK1YDR006C TY1A-DR3Q12441 440 aa3.57□□□□□ -1.84
SOK1YDR006C DUT1P33317 147 aa3.57□□□□□ -1.84
SOK1YDR006C WTM2Q12206 467 aa3.57□□□□□ -1.84
SOK1YDR006C HXK1P04806 485 aaKnown RBP3.56□□□□□ -1.84
SOK1YDR006C CYC8P14922 966 aa3.56□□□□□ -1.84
SOK1YDR006C VMA3P25515 160 aa3.56□□□□□ -1.84
SOK1YDR006C SUT1P53032 299 aaKnown RBP3.56□□□□□ -1.84
SOK1YDR006C ITC1P53125 1264 aa3.56□□□□□ -1.84
SOK1YDR006C MRF1P30775 413 aaPredicted RBP3.56□□□□□ -1.84
SOK1YDR006C SEC6P32844 805 aa3.56□□□□□ -1.84
SOK1YDR006C EBP2P36049 427 aaKnown RBP3.56□□□□□ -1.84
SOK1YDR006C RAS1P01119 309 aa3.55□□□□□ -1.84
SOK1YDR006C MPH2P0CD99 609 aa3.55□□□□□ -1.84
SOK1YDR006C PWP2P25635 923 aaKnown RBP3.55□□□□□ -1.84
SOK1YDR006C UTR2P32623 467 aa3.55□□□□□ -1.84
SOK1YDR006C VPS24P36095 224 aaKnown RBP3.55□□□□□ -1.84
SOK1YDR006C FRK1Q03002 865 aaPredicted RBP3.55□□□□□ -1.84
SOK1YDR006C DFG5Q05031 458 aa3.55□□□□□ -1.84
SOK1YDR006C PES4P39684 611 aa3.55□□□□□ -1.84
SOK1YDR006C BNA1P47096 177 aa3.55□□□□□ -1.84
SOK1YDR006C SAS4Q04003 481 aa3.55□□□□□ -1.84
SOK1YDR006C MET32Q12041 191 aa3.55□□□□□ -1.84
SOK1YDR006C YKL069WP36088 180 aa3.54□□□□□ -1.84
SOK1YDR006C NAB3P38996 802 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
SOK1YDR006C SSN3P39073 555 aa3.54□□□□□ -1.84
SOK1YDR006C RSC4Q02206 625 aa3.54□□□□□ -1.84
SOK1YDR006C BDS1Q08347 646 aa3.54□□□□□ -1.84
SOK1YDR006C NKP1Q12493 238 aa3.54□□□□□ -1.84
SOK1YDR006C TRK1P12685 1235 aa3.54□□□□□ -1.84
SOK1YDR006C GPG1P53130 126 aa3.54□□□□□ -1.84
SOK1YDR006C FOL1P53848 824 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms