RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.51□□□□□ -2.17
CCDC7-215ENST00000639629 GPR37L1O60883 481 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 SWT1Q5T5J6 900 aaKnown RBP1.5□□□□□ -2.17
CCDC7-215ENST00000639629 TRIM47Q96LD4 638 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 ZC3H4Q9UPT8 1303 aaKnown RBP1.5□□□□□ -2.17
CCDC7-215ENST00000639629 ITGB2P05107 769 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 SH3BP5LQ7L8J4 393 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 SNIP1Q8TAD8 396 aaKnown RBP1.5□□□□□ -2.17
CCDC7-215ENST00000639629 KCTD12Q96CX2 325 aaKnown RBP1.5□□□□□ -2.17
CCDC7-215ENST00000639629 HPS5Q9UPZ3 1129 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 H3BM21 787 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 LYPD8Q6UX82 237 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 VSIG10Q8N0Z9 540 aa1.5□□□□□ -2.17
CCDC7-215ENST00000639629 GNPATO15228 680 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 ARHGEF15O94989 841 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 HOXB4P17483 251 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-215ENST00000639629 NBR1Q14596 966 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 FBXO31Q5XUX0 539 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-215ENST00000639629 TRAF7Q6Q0C0 670 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 SCUBE3Q8IX30 993 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 GPSM3Q9Y4H4 160 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 P3H3Q8IVL6 736 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 ZNF295-AS1Q8N0V1 137 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 C7orf43Q8WVR3 580 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 GPKOWQ92917 476 aaPredicted RBP eCLIP1.49□□□□□ -2.17
CCDC7-215ENST00000639629 EVA1BQ9NVM1 165 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 KDM2AQ9Y2K7 1162 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 NR1I2O75469 434 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 SKOR1P84550 965 aa1.49□□□□□ -2.17
CCDC7-215ENST00000639629 UBAP2LQ14157 1087 aaKnown RBP1.49□□□□□ -2.17
CCDC7-215ENST00000639629 LILRB3O75022 631 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 PPP4CP60510 307 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 ZNF516Q92618 1163 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 JUNDP17535 347 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 ATP6V1AP38606 617 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 PTPRNQ16849 979 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 NKX2-3Q8TAU0 364 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 RBM46Q8TBY0 533 aaKnown RBP1.48□□□□□ -2.17
CCDC7-215ENST00000639629 KIFC2Q96AC6 838 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 HOXA2O43364 376 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 ZNF775Q96BV0 537 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-215ENST00000639629 GMCL1Q96IK5 515 aa1.48□□□□□ -2.17
CCDC7-215ENST00000639629 FECHP22830 423 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 SLC19A1P41440 591 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 BLOC1S3Q6QNY0 202 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 GNL3Q9BVP2 549 aaKnown RBP eCLIP1.47□□□□□ -2.17
CCDC7-215ENST00000639629 PNMA3Q9UL41 463 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 GRM5P41594 1212 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 REPIN1Q9BWE0 567 aaKnown RBP1.47□□□□□ -2.17
CCDC7-215ENST00000639629 PCDHGC3Q9UN70 934 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 SOS2Q07890 1332 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-215ENST00000639629 PLCB2Q00722 1185 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 WDR44Q5JSH3 913 aa1.47□□□□□ -2.17
CCDC7-215ENST00000639629 KDF1Q8NAX2 398 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-215ENST00000639629 DACH1Q9UI36 760 aa1.46□□□□□ -2.18
CCDC7-215ENST00000639629 WASLO00401 505 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-215ENST00000639629 Q3C1V9 767 aa1.46□□□□□ -2.18
CCDC7-215ENST00000639629 ALYREFQ86V81 257 aaKnown RBP1.46□□□□□ -2.18
CCDC7-215ENST00000639629 MCCD1P59942 119 aaPredicted RBP1.46□□□□□ -2.18
CCDC7-215ENST00000639629 FOXK2Q01167 660 aa1.46□□□□□ -2.18
CCDC7-215ENST00000639629 KRTAP19-1Q8IUB9 90 aa1.46□□□□□ -2.18
CCDC7-215ENST00000639629 KCNH8Q96L42 1107 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 FMNL1O95466 1100 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-215ENST00000639629 PTCRAQ6ISU1 281 aaPredicted RBP1.45□□□□□ -2.18
CCDC7-215ENST00000639629 TRIM46Q7Z4K8 759 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 SPIRE2Q8WWL2 714 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 NDFIP2Q9NV92 336 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 SPATA31C2B4DYI2 1134 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 GFRA3O60609 400 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 PHTF2Q8N3S3 785 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 PRKD2Q9BZL6 878 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 SLC27A5Q9Y2P5 690 aa1.45□□□□□ -2.18
CCDC7-215ENST00000639629 SPDYE5A6NIY4 337 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 TERTO14746 1132 aaKnown RBP1.44□□□□□ -2.18
CCDC7-215ENST00000639629 VARSP26640 1264 aaKnown RBP1.44□□□□□ -2.18
CCDC7-215ENST00000639629 RETREG3Q86VR2 466 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 SLC6A16Q9GZN6 736 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 TSHZ2Q9NRE2 1034 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 DKK1O94907 266 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 KCNH2Q12809 1159 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 RSBN1LQ6PCB5 846 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-215ENST00000639629 PSMG3-AS1Q96PY0 264 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 C4orf48Q5BLP8 95 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 SULF1Q8IWU6 871 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 DDX12PQ92771 950 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 USB1Q9BQ65 265 aaKnown RBP1.44□□□□□ -2.18
CCDC7-215ENST00000639629 TM4SF5O14894 197 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 ITGB7P26010 798 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 KMT5BQ4FZB7 885 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 ATP13A2Q9NQ11 1180 aa1.44□□□□□ -2.18
CCDC7-215ENST00000639629 SLC35F4A4IF30 521 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 SEMA3EO15041 775 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 TRAK2O60296 914 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 RNF144AP50876 292 aaPredicted RBP1.43□□□□□ -2.18
CCDC7-215ENST00000639629 SMYD5Q6GMV2 418 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 SPSB2Q99619 263 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 SENP2Q9HC62 589 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 RTN4Q9NQC3 1192 aaKnown RBP1.43□□□□□ -2.18
CCDC7-215ENST00000639629 PRDM6Q9NQX0 595 aa1.43□□□□□ -2.18
CCDC7-215ENST00000639629 CFHP08603 1231 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms