RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 MTMR14Q8NCE2 650 aa9.01□□□□□ -0.97
TRAPPC9-216ENST00000634178 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
TRAPPC9-216ENST00000634178 KIAA1468Q9P260 1216 aa9□□□□□ -0.97
TRAPPC9-216ENST00000634178 ZBTB7CA1YPR0 619 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 SMAPO00193 183 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 FDX1P10109 184 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 QPCTQ16769 361 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 PROX2Q3B8N5 592 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 PCDHB15Q9Y5E8 787 aa8.99□□□□□ -0.97
TRAPPC9-216ENST00000634178 HOXA2O43364 376 aa8.98□□□□□ -0.97
TRAPPC9-216ENST00000634178 ITGBL1O95965 494 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC9-216ENST00000634178 ABL2P42684 1182 aa8.98□□□□□ -0.97
TRAPPC9-216ENST00000634178 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC9-216ENST00000634178 RABGEF1Q9UJ41 708 aa8.98□□□□□ -0.97
TRAPPC9-216ENST00000634178 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 USP17L8P0C7I0 530 aa8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 RTL5Q5HYW3 569 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 FBXO31Q5XUX0 539 aaPredicted RBP8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 NBPF3Q9H094 633 aa8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 NDUFB9Q9Y6M9 179 aa8.97□□□□□ -0.97
TRAPPC9-216ENST00000634178 HRCP23327 699 aa8.96□□□□□ -0.98
TRAPPC9-216ENST00000634178 HELBQ8NG08 1087 aaPredicted RBP8.96□□□□□ -0.98
TRAPPC9-216ENST00000634178 CALR3Q96L12 384 aaKnown RBP8.96□□□□□ -0.98
TRAPPC9-216ENST00000634178 PDE4CQ08493 712 aa8.95□□□□□ -0.98
TRAPPC9-216ENST00000634178 SWT1Q5T5J6 900 aaKnown RBP8.95□□□□□ -0.98
TRAPPC9-216ENST00000634178 SLF2Q8IX21 1173 aa8.95□□□□□ -0.98
TRAPPC9-216ENST00000634178 CABLES1Q8TDN4 633 aa8.95□□□□□ -0.98
TRAPPC9-216ENST00000634178 NECTIN2Q92692 538 aa8.95□□□□□ -0.98
TRAPPC9-216ENST00000634178 PPP1R15AO75807 674 aaPredicted RBP8.94□□□□□ -0.98
TRAPPC9-216ENST00000634178 MTMR2Q13614 643 aa8.94□□□□□ -0.98
TRAPPC9-216ENST00000634178 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
TRAPPC9-216ENST00000634178 FAM98CQ17RN3 349 aaKnown RBP8.93□□□□□ -0.98
TRAPPC9-216ENST00000634178 TBC1D2BQ9UPU7 963 aa8.93□□□□□ -0.98
TRAPPC9-216ENST00000634178 ACIN1Q9UKV3 1341 aaKnown RBP8.93□□□□□ -0.98
TRAPPC9-216ENST00000634178 BCAMP50895 628 aa8.92□□□□□ -0.98
TRAPPC9-216ENST00000634178 LAPTM4BQ86VI4 370 aa8.92□□□□□ -0.98
TRAPPC9-216ENST00000634178 SLC10A3P09131 477 aa8.91□□□□□ -0.98
TRAPPC9-216ENST00000634178 KCTD17Q8N5Z5 321 aa8.91□□□□□ -0.98
TRAPPC9-216ENST00000634178 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
TRAPPC9-216ENST00000634178 ANKK1Q8NFD2 765 aa8.9□□□□□ -0.98
TRAPPC9-216ENST00000634178 GLMNQ92990 594 aa8.9□□□□□ -0.98
TRAPPC9-216ENST00000634178 C6orf229H3BNL8 230 aa8.89□□□□□ -0.99
TRAPPC9-216ENST00000634178 KMT5BQ4FZB7 885 aa8.89□□□□□ -0.99
TRAPPC9-216ENST00000634178 PCDHGC3Q9UN70 934 aa8.89□□□□□ -0.99
TRAPPC9-216ENST00000634178 CCDC180Q9P1Z9 1646 aa8.89□□□□□ -0.99
TRAPPC9-216ENST00000634178 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 LCE2BO14633 110 aa8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 PNMA1Q8ND90 353 aa8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 TSC1Q92574 1164 aa8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 GJD4Q96KN9 370 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
TRAPPC9-216ENST00000634178 CFHP08603 1231 aa8.87□□□□□ -0.99
TRAPPC9-216ENST00000634178 CTDSPL2Q05D32 466 aa8.87□□□□□ -0.99
TRAPPC9-216ENST00000634178 FUT2Q10981 343 aa8.86□□□□□ -0.99
TRAPPC9-216ENST00000634178 PRR14Q9BWN1 585 aa8.86□□□□□ -0.99
TRAPPC9-216ENST00000634178 SOX11P35716 441 aa8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 GUCA2AQ02747 115 aa8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 Q3C1V9 767 aa8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 ZFRQ96KR1 1074 aaKnown RBP8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 WBP1LQ9NX94 342 aa8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
TRAPPC9-216ENST00000634178 POM121CA8CG34 1229 aa8.84□□□□□ -0.99
TRAPPC9-216ENST00000634178 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
TRAPPC9-216ENST00000634178 Q6ZNB5 142 aa8.84□□□□□ -0.99
TRAPPC9-216ENST00000634178 RNF40O75150 1001 aa8.83□□□□□ -1
TRAPPC9-216ENST00000634178 RANGAP1P46060 587 aaPredicted RBP8.83□□□□□ -1
TRAPPC9-216ENST00000634178 IRF5Q13568 498 aa8.83□□□□□ -1
TRAPPC9-216ENST00000634178 CFAP99D6REC4 459 aa8.82□□□□□ -1
TRAPPC9-216ENST00000634178 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
TRAPPC9-216ENST00000634178 PRR7Q8TB68 274 aa8.82□□□□□ -1
TRAPPC9-216ENST00000634178 HLA-CQ95604 372 aa8.82□□□□□ -1
TRAPPC9-216ENST00000634178 TRIM34Q9BYJ4 488 aa8.82□□□□□ -1
TRAPPC9-216ENST00000634178 PATL2C9JE40 543 aaKnown RBP8.81□□□□□ -1
TRAPPC9-216ENST00000634178 DESI1Q6ICB0 168 aa8.81□□□□□ -1
TRAPPC9-216ENST00000634178 RETREG3Q86VR2 466 aa8.81□□□□□ -1
TRAPPC9-216ENST00000634178 RETREG2Q8NC44 543 aa8.81□□□□□ -1
TRAPPC9-216ENST00000634178 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
TRAPPC9-216ENST00000634178 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
TRAPPC9-216ENST00000634178 HMX1Q9NP08 348 aaPredicted RBP8.81□□□□□ -1
TRAPPC9-216ENST00000634178 LRCH3Q96II8 777 aa8.8□□□□□ -1
TRAPPC9-216ENST00000634178 KCNC4Q03721 635 aa8.79□□□□□ -1
TRAPPC9-216ENST00000634178 ACTN4O43707 911 aaKnown RBP8.78□□□□□ -1
TRAPPC9-216ENST00000634178 VAC14Q08AM6 782 aa8.78□□□□□ -1
TRAPPC9-216ENST00000634178 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.78□□□□□ -1
TRAPPC9-216ENST00000634178 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRAPPC9-216ENST00000634178 SEMA3FQ13275 785 aa8.77□□□□□ -1.01
TRAPPC9-216ENST00000634178 MORN1Q5T089 497 aa8.77□□□□□ -1.01
TRAPPC9-216ENST00000634178 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
TRAPPC9-216ENST00000634178 ALG2Q9H553 416 aa8.77□□□□□ -1.01
TRAPPC9-216ENST00000634178 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
TRAPPC9-216ENST00000634178 PPP1R12CQ9BZL4 782 aa8.76□□□□□ -1.01
TRAPPC9-216ENST00000634178 NR6A1Q15406 480 aa8.75□□□□□ -1.01
TRAPPC9-216ENST00000634178 SYMPKQ92797 1274 aaKnown RBP8.75□□□□□ -1.01
TRAPPC9-216ENST00000634178 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
TRAPPC9-216ENST00000634178 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
TRAPPC9-216ENST00000634178 ADAMTS19Q8TE59 1207 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms