RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 AEBP2Q6ZN18 517 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC9-216ENST00000634178 CHIC1Q5VXU3 224 aa21.35■■□□□ 1.01
TRAPPC9-216ENST00000634178 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC9-216ENST00000634178 PHF23Q9BUL5 403 aaPredicted RBP19.15■□□□□ 0.66
TRAPPC9-216ENST00000634178 FOXD1Q16676 465 aa18.22■□□□□ 0.51
TRAPPC9-216ENST00000634178 POTEDQ86YR6 584 aa17.27■□□□□ 0.36
TRAPPC9-216ENST00000634178 MSH5O43196 834 aa17.08■□□□□ 0.32
TRAPPC9-216ENST00000634178 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC9-216ENST00000634178 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
TRAPPC9-216ENST00000634178 PPP6R1Q9UPN7 881 aa16.83■□□□□ 0.28
TRAPPC9-216ENST00000634178 ADRA2BP18089 450 aa16.71■□□□□ 0.27
TRAPPC9-216ENST00000634178 MAPK8IP2Q13387 824 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-216ENST00000634178 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
TRAPPC9-216ENST00000634178 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
TRAPPC9-216ENST00000634178 CACNB1Q02641 598 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC9-216ENST00000634178 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
TRAPPC9-216ENST00000634178 HOXD11P31277 338 aaPredicted RBP14.73□□□□□ -0.05
TRAPPC9-216ENST00000634178 DCAF8L1A6NGE4 600 aa14.68□□□□□ -0.06
TRAPPC9-216ENST00000634178 KCNA4P22459 653 aa14.65□□□□□ -0.06
TRAPPC9-216ENST00000634178 RNF39Q9H2S5 420 aa14.61□□□□□ -0.07
TRAPPC9-216ENST00000634178 CNKSR2Q8WXI2 1034 aa14.53□□□□□ -0.08
TRAPPC9-216ENST00000634178 RNF216Q9NWF9 866 aaPredicted RBP14.5□□□□□ -0.09
TRAPPC9-216ENST00000634178 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
TRAPPC9-216ENST00000634178 C1QBPQ07021 282 aaKnown RBP14.32□□□□□ -0.12
TRAPPC9-216ENST00000634178 NCBP3Q53F19 620 aaKnown RBP14.29□□□□□ -0.12
TRAPPC9-216ENST00000634178 DNAJC5BQ9UF47 199 aa14.25□□□□□ -0.13
TRAPPC9-216ENST00000634178 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
TRAPPC9-216ENST00000634178 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
TRAPPC9-216ENST00000634178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC9-216ENST00000634178 CSRNP3Q8WYN3 585 aa13.9□□□□□ -0.18
TRAPPC9-216ENST00000634178 U3KPZ7 1027 aaPredicted RBP13.72□□□□□ -0.21
TRAPPC9-216ENST00000634178 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC9-216ENST00000634178 DSG3P32926 999 aa13.58□□□□□ -0.24
TRAPPC9-216ENST00000634178 CAPN15O75808 1086 aa13.5□□□□□ -0.25
TRAPPC9-216ENST00000634178 POTEHQ6S545 545 aa13.44□□□□□ -0.26
TRAPPC9-216ENST00000634178 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
TRAPPC9-216ENST00000634178 ZBTB22O15209 634 aa13.42□□□□□ -0.26
TRAPPC9-216ENST00000634178 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
TRAPPC9-216ENST00000634178 ABCB7O75027 752 aa13.22□□□□□ -0.29
TRAPPC9-216ENST00000634178 TRHP20396 242 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC9-216ENST00000634178 ZNF219Q9P2Y4 722 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC9-216ENST00000634178 APLP2Q06481 763 aa13.13□□□□□ -0.31
TRAPPC9-216ENST00000634178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC9-216ENST00000634178 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-216ENST00000634178 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC9-216ENST00000634178 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
TRAPPC9-216ENST00000634178 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC9-216ENST00000634178 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
TRAPPC9-216ENST00000634178 POLA2Q14181 598 aa12.81□□□□□ -0.36
TRAPPC9-216ENST00000634178 CHRDL2Q6WN34 429 aa12.77□□□□□ -0.37
TRAPPC9-216ENST00000634178 ATF5Q9Y2D1 282 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-216ENST00000634178 AMER1Q5JTC6 1135 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC9-216ENST00000634178 FKBP8Q14318 412 aa12.58□□□□□ -0.4
TRAPPC9-216ENST00000634178 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
TRAPPC9-216ENST00000634178 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC9-216ENST00000634178 OSCARQ8IYS5 282 aa12.47□□□□□ -0.41
TRAPPC9-216ENST00000634178 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-216ENST00000634178 SP7Q8TDD2 431 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-216ENST00000634178 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-216ENST00000634178 PIP4P2Q8N4L2 257 aa12.43□□□□□ -0.42
TRAPPC9-216ENST00000634178 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
TRAPPC9-216ENST00000634178 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
TRAPPC9-216ENST00000634178 FXR2P51116 673 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC9-216ENST00000634178 HAX1O00165 279 aa12.19□□□□□ -0.46
TRAPPC9-216ENST00000634178 EVX2Q03828 476 aa12.16□□□□□ -0.46
TRAPPC9-216ENST00000634178 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
TRAPPC9-216ENST00000634178 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
TRAPPC9-216ENST00000634178 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
TRAPPC9-216ENST00000634178 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
TRAPPC9-216ENST00000634178 MKRN4PQ13434 485 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC9-216ENST00000634178 FBLN2P98095 1184 aa12.04□□□□□ -0.48
TRAPPC9-216ENST00000634178 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
TRAPPC9-216ENST00000634178 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
TRAPPC9-216ENST00000634178 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
TRAPPC9-216ENST00000634178 SPDYE1Q8NFV5 336 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-216ENST00000634178 CLEC11AQ9Y240 323 aa11.94□□□□□ -0.5
TRAPPC9-216ENST00000634178 C19orf67A6NJJ6 358 aa11.93□□□□□ -0.5
TRAPPC9-216ENST00000634178 PROM2Q8N271 834 aa11.88□□□□□ -0.51
TRAPPC9-216ENST00000634178 ZNF692Q9BU19 519 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-216ENST00000634178 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
TRAPPC9-216ENST00000634178 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC9-216ENST00000634178 GABBR2O75899 941 aa11.8□□□□□ -0.52
TRAPPC9-216ENST00000634178 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
TRAPPC9-216ENST00000634178 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
TRAPPC9-216ENST00000634178 LHX8Q68G74 356 aa11.65□□□□□ -0.54
TRAPPC9-216ENST00000634178 IFNLR1Q8IU57 520 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC9-216ENST00000634178 POTEIP0CG38 1075 aa11.62□□□□□ -0.55
TRAPPC9-216ENST00000634178 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-216ENST00000634178 CD44P16070 742 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-216ENST00000634178 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
TRAPPC9-216ENST00000634178 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
TRAPPC9-216ENST00000634178 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
TRAPPC9-216ENST00000634178 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
TRAPPC9-216ENST00000634178 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
TRAPPC9-216ENST00000634178 PKD2Q13563 968 aa11.48□□□□□ -0.57
TRAPPC9-216ENST00000634178 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
TRAPPC9-216ENST00000634178 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-216ENST00000634178 CREBZFQ9NS37 354 aa11.42□□□□□ -0.58
TRAPPC9-216ENST00000634178 CLCN6P51797 869 aa11.41□□□□□ -0.58
TRAPPC9-216ENST00000634178 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms