RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 XRN1Q8IZH2 1706 aaKnown RBP13.84□□□□□ -0.19
LINC01560-202ENST00000624822 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
LINC01560-202ENST00000624822 PROSER2Q86WR7 435 aaPredicted RBP13.83□□□□□ -0.2
LINC01560-202ENST00000624822 METP08581 1390 aa13.83□□□□□ -0.2
LINC01560-202ENST00000624822 AMOTL2Q9Y2J4 779 aa13.82□□□□□ -0.2
LINC01560-202ENST00000624822 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
LINC01560-202ENST00000624822 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
LINC01560-202ENST00000624822 RBM33Q96EV2 1170 aaKnown RBP13.8□□□□□ -0.2
LINC01560-202ENST00000624822 KNDC1Q76NI1 1749 aa13.8□□□□□ -0.2
LINC01560-202ENST00000624822 TMEM94Q12767 1356 aa13.8□□□□□ -0.2
LINC01560-202ENST00000624822 C14orf37Q86TY3 774 aa13.79□□□□□ -0.2
LINC01560-202ENST00000624822 ASXL1Q8IXJ9 1541 aa13.79□□□□□ -0.2
LINC01560-202ENST00000624822 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
LINC01560-202ENST00000624822 FBXO41Q8TF61 875 aa13.78□□□□□ -0.2
LINC01560-202ENST00000624822 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
LINC01560-202ENST00000624822 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.21
LINC01560-202ENST00000624822 TMEM132EQ6IEE7 984 aa13.77□□□□□ -0.21
LINC01560-202ENST00000624822 NALCNQ8IZF0 1738 aa13.77□□□□□ -0.21
LINC01560-202ENST00000624822 TONSLQ96HA7 1378 aa13.77□□□□□ -0.21
LINC01560-202ENST00000624822 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.77□□□□□ -0.21
LINC01560-202ENST00000624822 KIAA1210Q9ULL0 1709 aa13.77□□□□□ -0.21
LINC01560-202ENST00000624822 MSH6P52701 1360 aa13.76□□□□□ -0.21
LINC01560-202ENST00000624822 L3MBTL2Q969R5 705 aa13.76□□□□□ -0.21
LINC01560-202ENST00000624822 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
LINC01560-202ENST00000624822 STK26Q9P289 416 aa13.76□□□□□ -0.21
LINC01560-202ENST00000624822 TOM1O60784 492 aa13.75□□□□□ -0.21
LINC01560-202ENST00000624822 CHADLQ6NUI6 762 aa13.75□□□□□ -0.21
LINC01560-202ENST00000624822 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
LINC01560-202ENST00000624822 PTCH1Q13635 1447 aa13.74□□□□□ -0.21
LINC01560-202ENST00000624822 YTHDC2Q9H6S0 1430 aaKnown RBP13.74□□□□□ -0.21
LINC01560-202ENST00000624822 TRPM1Q7Z4N2 1603 aa13.73□□□□□ -0.21
LINC01560-202ENST00000624822 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
LINC01560-202ENST00000624822 ILDR1Q86SU0 546 aaPredicted RBP13.73□□□□□ -0.21
LINC01560-202ENST00000624822 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
LINC01560-202ENST00000624822 LRPPRCP42704 1394 aaKnown RBP13.72□□□□□ -0.21
LINC01560-202ENST00000624822 ARHGEF28Q8N1W1 1705 aaKnown RBP13.72□□□□□ -0.21
LINC01560-202ENST00000624822 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
LINC01560-202ENST00000624822 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
LINC01560-202ENST00000624822 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
LINC01560-202ENST00000624822 TECPR2O15040 1411 aa13.7□□□□□ -0.22
LINC01560-202ENST00000624822 ROBO1Q9Y6N7 1651 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 ATF3P18847 181 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 C19orf44Q9H6X5 657 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 ADGRL3Q9HAR2 1447 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 ABCC11Q96J66 1382 aa13.69□□□□□ -0.22
LINC01560-202ENST00000624822 PRR29P0C7W0 189 aa13.68□□□□□ -0.22
LINC01560-202ENST00000624822 WAPLQ7Z5K2 1190 aa13.68□□□□□ -0.22
LINC01560-202ENST00000624822 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
LINC01560-202ENST00000624822 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
LINC01560-202ENST00000624822 POGKQ9P215 609 aa13.67□□□□□ -0.22
LINC01560-202ENST00000624822 DCCP43146 1447 aa13.66□□□□□ -0.22
LINC01560-202ENST00000624822 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01560-202ENST00000624822 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
LINC01560-202ENST00000624822 PLEKHH1Q9ULM0 1364 aa13.66□□□□□ -0.22
LINC01560-202ENST00000624822 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
LINC01560-202ENST00000624822 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
LINC01560-202ENST00000624822 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
LINC01560-202ENST00000624822 ROCK2O75116 1388 aaKnown RBP13.65□□□□□ -0.22
LINC01560-202ENST00000624822 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.22
LINC01560-202ENST00000624822 FMN2Q9NZ56 1722 aa13.64□□□□□ -0.23
LINC01560-202ENST00000624822 RGPD8O14715 1765 aaPredicted RBP13.64□□□□□ -0.23
LINC01560-202ENST00000624822 QRICH2Q9H0J4 1663 aa13.64□□□□□ -0.23
LINC01560-202ENST00000624822 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LINC01560-202ENST00000624822 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
LINC01560-202ENST00000624822 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
LINC01560-202ENST00000624822 PHLPP1O60346 1717 aa13.63□□□□□ -0.23
LINC01560-202ENST00000624822 SIRT1Q96EB6 747 aa13.62□□□□□ -0.23
LINC01560-202ENST00000624822 MST1RQ04912 1400 aa13.61□□□□□ -0.23
LINC01560-202ENST00000624822 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
LINC01560-202ENST00000624822 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
LINC01560-202ENST00000624822 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
LINC01560-202ENST00000624822 MINK1Q8N4C8 1332 aaPredicted RBP13.6□□□□□ -0.23
LINC01560-202ENST00000624822 HIRIP3Q9BW71 556 aaPredicted RBP13.59□□□□□ -0.23
LINC01560-202ENST00000624822 NHSL1Q5SYE7 1610 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 HSPA1LP34931 641 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 TIMELESSQ9UNS1 1208 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 ITSN1Q15811 1721 aa13.58□□□□□ -0.24
LINC01560-202ENST00000624822 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.24
LINC01560-202ENST00000624822 CENPJQ9HC77 1338 aaPredicted RBP13.56□□□□□ -0.24
LINC01560-202ENST00000624822 KIF1AQ12756 1690 aa13.56□□□□□ -0.24
LINC01560-202ENST00000624822 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
LINC01560-202ENST00000624822 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
LINC01560-202ENST00000624822 ESCO1Q5FWF5 840 aa13.55□□□□□ -0.24
LINC01560-202ENST00000624822 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
LINC01560-202ENST00000624822 GPRASP1Q5JY77 1395 aa13.55□□□□□ -0.24
LINC01560-202ENST00000624822 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
LINC01560-202ENST00000624822 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
LINC01560-202ENST00000624822 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
LINC01560-202ENST00000624822 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.25
LINC01560-202ENST00000624822 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
LINC01560-202ENST00000624822 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
LINC01560-202ENST00000624822 ANKARQ7Z5J8 1434 aa13.5□□□□□ -0.25
LINC01560-202ENST00000624822 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
LINC01560-202ENST00000624822 GABBR2O75899 941 aa13.49□□□□□ -0.25
LINC01560-202ENST00000624822 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
LINC01560-202ENST00000624822 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
LINC01560-202ENST00000624822 ATP7BP35670 1465 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms